Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P3L36_RS11100 Genome accession   NZ_CP120654
Coordinates   2205523..2206296 (+) Length   257 a.a.
NCBI ID   WP_000456086.1    Uniprot ID   A0AB38VKI2
Organism   Streptococcus agalactiae strain Guangzhou-SAG036     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2200523..2211296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L36_RS11090 (P3L36_11090) rlmH 2203516..2203995 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P3L36_RS11095 (P3L36_11095) htrA 2204196..2205425 (+) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  P3L36_RS11100 (P3L36_11100) spo0J 2205523..2206296 (+) 774 WP_000456086.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29282.74 Da        Isoelectric Point: 9.8145

>NTDB_id=807551 P3L36_RS11100 WP_000456086.1 2205523..2206296(+) (spo0J) [Streptococcus agalactiae strain Guangzhou-SAG036]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFNNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=807551 P3L36_RS11100 WP_000456086.1 2205523..2206296(+) (spo0J) [Streptococcus agalactiae strain Guangzhou-SAG036]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCAATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572