Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P3L36_RS02490 Genome accession   NZ_CP120654
Coordinates   427623..428348 (+) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae strain Guangzhou-SAG036     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 422623..433348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L36_RS02455 (P3L36_02455) tsaE 423425..423868 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  P3L36_RS02460 (P3L36_02460) - 423861..424382 (+) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  P3L36_RS02465 (P3L36_02465) - 424391..425698 (+) 1308 WP_000708161.1 LCP family protein -
  P3L36_RS02470 (P3L36_02470) - 425762..426058 (-) 297 WP_000690175.1 hypothetical protein -
  P3L36_RS02475 (P3L36_02475) - 426055..426474 (-) 420 WP_000368099.1 HIT family protein -
  P3L36_RS02480 (P3L36_02480) - 426810..427313 (+) 504 WP_000773459.1 hypothetical protein -
  P3L36_RS02485 (P3L36_02485) - 427365..427551 (-) 187 Protein_417 hypothetical protein -
  P3L36_RS02490 (P3L36_02490) pptA 427623..428348 (+) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  P3L36_RS02495 (P3L36_02495) - 428350..429384 (+) 1035 WP_000732710.1 ABC transporter permease -
  P3L36_RS02500 (P3L36_02500) - 429442..430242 (+) 801 WP_050151850.1 phosphotransferase family protein -
  P3L36_RS02505 (P3L36_02505) trmB 430232..430867 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  P3L36_RS02515 (P3L36_02515) rimP 431356..431832 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  P3L36_RS02520 (P3L36_02520) nusA 431868..433019 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  P3L36_RS02525 (P3L36_02525) - 433041..433337 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=807517 P3L36_RS02490 WP_000912314.1 427623..428348(+) (pptA) [Streptococcus agalactiae strain Guangzhou-SAG036]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=807517 P3L36_RS02490 WP_000912314.1 427623..428348(+) (pptA) [Streptococcus agalactiae strain Guangzhou-SAG036]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGAGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATCTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763