Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HXS58_RS01640 | Genome accession | NZ_AP023036 |
| Coordinates | 322224..322619 (+) | Length | 131 a.a. |
| NCBI ID | WP_006563893.1 | Uniprot ID | A0A6J4CVV1 |
| Organism | Helicobacter suis strain NHP19-0020 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 317224..327619
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS58_RS01620 (NHP190020_03400) | ilvC | 319387..320367 (+) | 981 | WP_176486221.1 | ketol-acid reductoisomerase | - |
| HXS58_RS01625 (NHP190020_03410) | minD | 320376..321176 (+) | 801 | WP_176485260.1 | septum site-determining protein MinD | - |
| HXS58_RS01630 (NHP190020_03420) | minE | 321173..321430 (+) | 258 | WP_034376430.1 | cell division topological specificity factor MinE | - |
| HXS58_RS01635 (NHP190020_03430) | dprA | 321418..322227 (+) | 810 | WP_006563892.1 | DNA-processing protein DprA | Machinery gene |
| HXS58_RS01640 (NHP190020_03440) | dprB | 322224..322619 (+) | 396 | WP_006563893.1 | Holliday junction resolvase RuvX | Machinery gene |
| HXS58_RS01645 (NHP190020_03450) | - | 322601..323323 (-) | 723 | WP_006563894.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HXS58_RS01650 (NHP190020_03460) | hemB | 323323..324294 (-) | 972 | WP_040499055.1 | porphobilinogen synthase | - |
| HXS58_RS01655 (NHP190020_03470) | - | 324287..325468 (-) | 1182 | WP_104685875.1 | amidophosphoribosyltransferase | - |
| HXS58_RS01660 (NHP190020_03480) | - | 325465..326745 (-) | 1281 | WP_176486111.1 | ArsS family sensor histidine kinase | - |
| HXS58_RS01665 (NHP190020_03490) | - | 326747..327430 (-) | 684 | WP_006563897.1 | response regulator transcription factor | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14821.61 Da Isoelectric Point: 10.1350
>NTDB_id=80746 HXS58_RS01640 WP_006563893.1 322224..322619(+) (dprB) [Helicobacter suis strain NHP19-0020]
MIIACDIGLKRIGLAIYAQKIILPLNSIKRINRKQASLELLHLLETKKATKLIVGLPHACYTTRQRVLHFINLLNFAPVI
YVEEDNSSVEALTNLWHLSSKKRQKASKDGALDSLAACEILRRYLAQEMLV
MIIACDIGLKRIGLAIYAQKIILPLNSIKRINRKQASLELLHLLETKKATKLIVGLPHACYTTRQRVLHFINLLNFAPVI
YVEEDNSSVEALTNLWHLSSKKRQKASKDGALDSLAACEILRRYLAQEMLV
Nucleotide
Download Length: 396 bp
>NTDB_id=80746 HXS58_RS01640 WP_006563893.1 322224..322619(+) (dprB) [Helicobacter suis strain NHP19-0020]
ATGATCATCGCTTGTGATATTGGGCTTAAACGAATCGGTCTTGCGATTTATGCACAAAAAATTATTCTGCCCCTTAATTC
CATTAAACGGATTAATCGCAAACAAGCTAGTTTAGAATTACTCCATTTGCTAGAAACTAAAAAGGCCACAAAACTCATCG
TCGGATTGCCCCATGCCTGCTACACCACACGCCAACGCGTTTTACATTTTATTAATCTACTTAACTTTGCGCCTGTGATT
TATGTTGAGGAAGATAATAGCAGTGTAGAGGCGCTTACTAATCTTTGGCATTTATCTAGCAAAAAACGCCAAAAAGCCAG
CAAAGACGGCGCACTAGATAGTTTGGCTGCCTGTGAGATTTTAAGGCGCTATCTAGCTCAAGAAATGTTGGTATAA
ATGATCATCGCTTGTGATATTGGGCTTAAACGAATCGGTCTTGCGATTTATGCACAAAAAATTATTCTGCCCCTTAATTC
CATTAAACGGATTAATCGCAAACAAGCTAGTTTAGAATTACTCCATTTGCTAGAAACTAAAAAGGCCACAAAACTCATCG
TCGGATTGCCCCATGCCTGCTACACCACACGCCAACGCGTTTTACATTTTATTAATCTACTTAACTTTGCGCCTGTGATT
TATGTTGAGGAAGATAATAGCAGTGTAGAGGCGCTTACTAATCTTTGGCATTTATCTAGCAAAAAACGCCAAAAAGCCAG
CAAAGACGGCGCACTAGATAGTTTGGCTGCCTGTGAGATTTTAAGGCGCTATCTAGCTCAAGAAATGTTGGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
51.587 |
96.183 |
0.496 |