Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   P6S76_RS07015 Genome accession   NZ_CP120641
Coordinates   1385996..1386460 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain YL2021     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380996..1391460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S76_RS06995 - 1381477..1383297 (+) 1821 WP_007409606.1 PAS domain-containing protein -
  P6S76_RS07000 - 1383322..1384491 (-) 1170 WP_007409607.1 aminotransferase A -
  P6S76_RS07005 - 1384692..1384853 (-) 162 WP_007409608.1 hypothetical protein -
  P6S76_RS07010 cheV 1385042..1385953 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  P6S76_RS07015 kre 1385996..1386460 (-) 465 WP_003154622.1 YkyB family protein Regulator
  P6S76_RS07020 - 1386583..1387875 (-) 1293 WP_007409610.1 MFS transporter -
  P6S76_RS07025 - 1387951..1388445 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  P6S76_RS07030 - 1388520..1389383 (-) 864 WP_007409612.1 metallophosphoesterase -
  P6S76_RS07035 fadH 1389528..1390292 (+) 765 WP_007409613.1 2,4-dienoyl-CoA reductase -
  P6S76_RS07040 - 1390406..1390954 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=807400 P6S76_RS07015 WP_003154622.1 1385996..1386460(-) (kre) [Bacillus velezensis strain YL2021]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=807400 P6S76_RS07015 WP_003154622.1 1385996..1386460(-) (kre) [Bacillus velezensis strain YL2021]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGTAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929