Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P6S76_RS02040 Genome accession   NZ_CP120641
Coordinates   442747..443700 (+) Length   317 a.a.
NCBI ID   WP_038462127.1    Uniprot ID   -
Organism   Bacillus velezensis strain YL2021     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 437747..448700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S76_RS02015 - 437794..439227 (+) 1434 WP_020953885.1 ATP-binding protein -
  P6S76_RS02020 rapC 439380..440528 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  P6S76_RS02025 phrC 440512..440631 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  P6S76_RS02030 - 440779..440874 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  P6S76_RS02035 - 440969..442333 (-) 1365 WP_007410272.1 aspartate kinase -
  P6S76_RS02040 ceuB 442747..443700 (+) 954 WP_038462127.1 ABC transporter permease Machinery gene
  P6S76_RS02045 - 443690..444637 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  P6S76_RS02050 - 444631..445389 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  P6S76_RS02055 - 445411..446355 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  P6S76_RS02060 - 446397..447821 (-) 1425 WP_007410276.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34975.26 Da        Isoelectric Point: 9.6741

>NTDB_id=807382 P6S76_RS02040 WP_038462127.1 442747..443700(+) (ceuB) [Bacillus velezensis strain YL2021]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGTVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=807382 P6S76_RS02040 WP_038462127.1 442747..443700(+) (ceuB) [Bacillus velezensis strain YL2021]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCATGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCACTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533