Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   P6S76_RS01845 Genome accession   NZ_CP120641
Coordinates   395679..395843 (+) Length   54 a.a.
NCBI ID   WP_272949499.1    Uniprot ID   -
Organism   Bacillus velezensis strain YL2021     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 390679..400843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6S76_RS01840 srfAB 392570..395662 (+) 3093 Protein_322 surfactin non-ribosomal peptide synthetase SrfAB -
  P6S76_RS01845 comS 395679..395843 (+) 165 WP_272949499.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6180.18 Da        Isoelectric Point: 12.0559

>NTDB_id=807379 P6S76_RS01845 WP_272949499.1 395679..395843(+) (comS) [Bacillus velezensis strain YL2021]
MRARRSSSLNRSDKRLIRSIILFPQHNAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=807379 P6S76_RS01845 WP_272949499.1 395679..395843(+) (comS) [Bacillus velezensis strain YL2021]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAA
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

59.091

81.481

0.481