Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG   Type   Machinery gene
Locus tag   QN282_RS00880 Genome accession   NZ_CP134689
Coordinates   146231..146602 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae strain HU05/19     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 141231..151602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN282_RS00860 (QN282_00860) - 143355..143720 (+) 366 WP_000285373.1 DUF1033 family protein -
  QN282_RS00865 (QN282_00865) comGA 143893..144864 (+) 972 WP_000250805.1 competence type IV pilus ATPase ComGA Machinery gene
  QN282_RS00870 (QN282_00870) comGB 144758..145801 (+) 1044 WP_223295889.1 competence type IV pilus assembly protein ComGB Machinery gene
  QN282_RS00875 (QN282_00875) comGF 145798..146253 (+) 456 WP_000793378.1 competence type IV pilus minor pilin ComGF Machinery gene
  QN282_RS00880 (QN282_00880) comGG 146231..146602 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  QN282_RS00885 (QN282_00885) comGH 146717..147691 (+) 975 WP_001008574.1 class I SAM-dependent methyltransferase Machinery gene
  QN282_RS00890 (QN282_00890) - 147723..148916 (+) 1194 WP_000047534.1 acetate kinase -
  QN282_RS00895 (QN282_00895) - 149068..149274 (+) 207 WP_000798241.1 helix-turn-helix transcriptional regulator -
  QN282_RS00900 (QN282_00900) - 149333..149470 (+) 138 WP_001865900.1 hypothetical protein -
  QN282_RS00905 (QN282_00905) - 149511..149966 (+) 456 WP_000905673.1 hypothetical protein -
  QN282_RS00910 (QN282_00910) - 150035..150700 (+) 666 WP_000008113.1 CPBP family intramembrane glutamic endopeptidase -
  QN282_RS00915 (QN282_00915) proC 150721..151491 (-) 771 WP_001865901.1 pyrroline-5-carboxylate reductase -

Sequence


Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=807296 QN282_RS00880 WP_000601104.1 146231..146602(+) (comGG) [Streptococcus agalactiae strain HU05/19]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=807296 QN282_RS00880 WP_000601104.1 146231..146602(+) (comGG) [Streptococcus agalactiae strain HU05/19]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366

  comGG Streptococcus mutans UA159

44.554

82.114

0.366