Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   QN337_RS10080 Genome accession   NZ_CP134688
Coordinates   1985555..1985926 (+) Length   123 a.a.
NCBI ID   WP_000601104.1    Uniprot ID   Q8E233
Organism   Streptococcus agalactiae strain MA07     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1980555..1990926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN337_RS10050 (QN337_10045) - 1982020..1982385 (+) 366 WP_000285373.1 DUF1033 family protein -
  QN337_RS10055 (QN337_10050) comGA 1982558..1983529 (+) 972 WP_047199570.1 competence type IV pilus ATPase ComGA Machinery gene
  QN337_RS10060 (QN337_10055) comGB 1983423..1984466 (+) 1044 WP_223295592.1 competence type IV pilus assembly protein ComGB Machinery gene
  QN337_RS10065 (QN337_10060) comGD 1984463..1984891 (+) 429 WP_000793381.1 competence type IV pilus minor pilin ComGD Machinery gene
  QN337_RS10070 (QN337_10065) comGE 1984863..1985162 (+) 300 WP_001867089.1 competence type IV pilus minor pilin ComGE Machinery gene
  QN337_RS10075 (QN337_10070) comGF 1985116..1985577 (+) 462 WP_001874060.1 competence type IV pilus minor pilin ComGF Machinery gene
  QN337_RS10080 (QN337_10075) comGG 1985555..1985926 (+) 372 WP_000601104.1 competence type IV pilus minor pilin ComGG Machinery gene
  QN337_RS10085 (QN337_10080) comGH 1986041..1987015 (+) 975 WP_001008570.1 class I SAM-dependent methyltransferase Machinery gene
  QN337_RS10090 (QN337_10085) - 1987047..1988240 (+) 1194 WP_000047535.1 acetate kinase -
  QN337_RS10095 (QN337_10090) - 1988391..1988597 (+) 207 WP_000798242.1 helix-turn-helix transcriptional regulator -
  QN337_RS10100 (QN337_10095) - 1988656..1988799 (+) 144 WP_410534407.1 hypothetical protein -
  QN337_RS10105 (QN337_10100) - 1988840..1989295 (+) 456 WP_000905674.1 hypothetical protein -
  QN337_RS10110 (QN337_10105) - 1989364..1990029 (+) 666 WP_000008111.1 CPBP family intramembrane glutamic endopeptidase -
  QN337_RS10115 (QN337_10110) proC 1990050..1990820 (-) 771 WP_001867096.1 pyrroline-5-carboxylate reductase -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13879.09 Da        Isoelectric Point: 10.0693

>NTDB_id=807280 QN337_RS10080 WP_000601104.1 1985555..1985926(+) (comGG) [Streptococcus agalactiae strain MA07]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQ
EGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=807280 QN337_RS10080 WP_000601104.1 1985555..1985926(+) (comGG) [Streptococcus agalactiae strain MA07]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGTGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGCTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAACAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8E233

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366
  comGG Streptococcus mutans UA159

44.554

82.114

0.366