Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   P5623_RS07985 Genome accession   NZ_CP120625
Coordinates   1415229..1415690 (+) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain DSM 103869     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1410229..1420690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5623_RS07960 (P5623_07960) - 1410266..1410763 (+) 498 WP_008348009.1 L,D-transpeptidase family protein -
  P5623_RS07965 (P5623_07965) - 1410837..1412114 (+) 1278 WP_056704826.1 MFS transporter -
  P5623_RS07970 (P5623_07970) - 1412683..1412898 (+) 216 WP_008348016.1 hypothetical protein -
  P5623_RS07975 (P5623_07975) - 1413055..1413999 (-) 945 WP_056704828.1 EamA family transporter -
  P5623_RS07980 (P5623_07980) - 1414113..1415009 (+) 897 WP_008348020.1 AraC family transcriptional regulator -
  P5623_RS07985 (P5623_07985) kre 1415229..1415690 (+) 462 WP_007498684.1 YkyB family protein Regulator
  P5623_RS07990 (P5623_07990) - 1415927..1416835 (-) 909 WP_008348035.1 chemotaxis protein -
  P5623_RS07995 (P5623_07995) - 1416909..1418220 (-) 1312 Protein_1477 MFS transporter -
  P5623_RS08000 (P5623_08000) - 1418345..1418884 (-) 540 WP_007498690.1 RDD family protein -
  P5623_RS08005 (P5623_08005) - 1419182..1419337 (+) 156 WP_277687789.1 hypothetical protein -
  P5623_RS08010 (P5623_08010) - 1419403..1420287 (-) 885 WP_007498692.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=807195 P5623_RS07985 WP_007498684.1 1415229..1415690(+) (kre) [Bacillus altitudinis strain DSM 103869]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=807195 P5623_RS07985 WP_007498684.1 1415229..1415690(+) (kre) [Bacillus altitudinis strain DSM 103869]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771