Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   P5623_RS07860 Genome accession   NZ_CP120625
Coordinates   1394609..1395190 (-) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain DSM 103869     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1389609..1400190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5623_RS07830 (P5623_07830) - 1389640..1390131 (-) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -
  P5623_RS07835 (P5623_07835) mobB 1390124..1390651 (-) 528 WP_019743802.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  P5623_RS07840 (P5623_07840) glp 1390633..1391907 (-) 1275 WP_025207267.1 gephyrin-like molybdotransferase Glp -
  P5623_RS07845 (P5623_07845) - 1391917..1392934 (-) 1018 Protein_1447 ThiF family adenylyltransferase -
  P5623_RS07850 (P5623_07850) - 1392964..1393545 (-) 582 WP_025207265.1 molybdenum cofactor guanylyltransferase -
  P5623_RS07855 (P5623_07855) - 1393629..1394546 (+) 918 WP_025207264.1 hypothetical protein -
  P5623_RS07860 (P5623_07860) rok 1394609..1395190 (-) 582 WP_007498648.1 hypothetical protein Regulator
  P5623_RS07865 (P5623_07865) - 1395672..1396130 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  P5623_RS07870 (P5623_07870) ahpA 1396406..1396948 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  P5623_RS07875 (P5623_07875) - 1397220..1398029 (+) 810 WP_210552423.1 mechanosensitive ion channel family protein -
  P5623_RS07880 (P5623_07880) - 1398054..1398296 (-) 243 WP_003211408.1 YkuS family protein -
  P5623_RS07885 (P5623_07885) - 1398347..1399525 (-) 1179 WP_060832294.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=807194 P5623_RS07860 WP_007498648.1 1394609..1395190(-) (rok) [Bacillus altitudinis strain DSM 103869]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=807194 P5623_RS07860 WP_007498648.1 1394609..1395190(-) (rok) [Bacillus altitudinis strain DSM 103869]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782