Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RL452_RS05980 Genome accession   NZ_CP134620
Coordinates   1225776..1227062 (+) Length   428 a.a.
NCBI ID   WP_000121115.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Sa9     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1220776..1232062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RL452_RS05950 (RL452_05945) - 1221171..1221284 (+) 114 WP_001789890.1 hypothetical protein -
  RL452_RS05955 (RL452_05950) tsf 1221319..1222200 (+) 882 WP_045158025.1 translation elongation factor Ts -
  RL452_RS05960 (RL452_05955) pyrH 1222337..1223059 (+) 723 WP_000057330.1 UMP kinase -
  RL452_RS05965 (RL452_05960) frr 1223078..1223632 (+) 555 WP_001280006.1 ribosome recycling factor -
  RL452_RS05970 (RL452_05965) - 1224005..1224775 (+) 771 WP_045158027.1 isoprenyl transferase -
  RL452_RS05975 (RL452_05970) - 1224782..1225564 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  RL452_RS05980 (RL452_05975) eeP 1225776..1227062 (+) 1287 WP_000121115.1 RIP metalloprotease RseP Regulator
  RL452_RS05985 (RL452_05980) - 1227082..1228785 (+) 1704 WP_000814113.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48223.62 Da        Isoelectric Point: 9.5201

>NTDB_id=807131 RL452_RS05980 WP_000121115.1 1225776..1227062(+) (eeP) [Staphylococcus aureus strain Sa9]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKIFEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVYGFKNFLIGSTYIFSAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=807131 RL452_RS05980 WP_000121115.1 1225776..1227062(+) (eeP) [Staphylococcus aureus strain Sa9]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATTACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTTTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATTTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACAACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAAACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTCTTCAAACCAATTGTATATGGATTTAAAAACTTTTTAATCGGTAGTACTTATATTTTTTCAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACTATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395