Detailed information NTG0807115

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: P5647_RS05965
• Genome accession: NZ_CP120622
• Coordinates: 1155941..1156894 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain DSM 1090
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1150941..1161894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5647_RS05940 (P5647_05940)	argF	1152773..1153732 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
P5647_RS05945 (P5647_05945)	yjzC	1153818..1153997 (+)	180	WP_003245356.1	YjzC family protein	-
P5647_RS05950 (P5647_05950)	yjzD	1154043..1154228 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
P5647_RS05955 (P5647_05955)	-	1154477..1155211 (+)	735	WP_003245223.1	hypothetical protein	-
P5647_RS05960 (P5647_05960)	-	1155293..1155850 (+)	558	WP_003232974.1	hypothetical protein	-
P5647_RS05965 (P5647_05965)	med	1155941..1156894 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
P5647_RS05970 (P5647_05970)	comZ	1156909..1157100 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
P5647_RS05975 (P5647_05975)	yjzB	1157130..1157369 (-)	240	WP_003232972.1	spore coat protein YjzB	-
P5647_RS05980 (P5647_05980)	fabH	1157534..1158472 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
P5647_RS05985 (P5647_05985)	fabF	1158495..1159736 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
P5647_RS05990 (P5647_05990)	yjaZ	1159812..1160597 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
P5647_RS05995 (P5647_05995)	appD	1160789..1161775 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=807115 P5647_RS05965 WP_003245494.1 1155941..1156894(+) (med) [Bacillus subtilis strain DSM 1090]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=807115 P5647_RS05965 WP_003245494.1 1155941..1156894(+) (med) [Bacillus subtilis strain DSM 1090]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1