Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5647_RS04445 Genome accession   NZ_CP120622
Coordinates   874938..875732 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain DSM 1090     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 869938..880732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5647_RS04415 (P5647_04415) sxzA 870777..871808 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  P5647_RS04420 (P5647_04420) yfhB 871923..872804 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  P5647_RS04425 (P5647_04425) yfhC 872892..873476 (+) 585 WP_003243940.1 nitroreductase -
  P5647_RS04430 (P5647_04430) yfhD 873515..873706 (-) 192 WP_003233561.1 YfhD family protein -
  P5647_RS04435 (P5647_04435) yfhE 873773..873883 (-) 111 WP_003223230.1 YfhE family protein -
  P5647_RS04440 (P5647_04440) yfhF 873938..874849 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  P5647_RS04445 (P5647_04445) recX 874938..875732 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  P5647_RS04450 (P5647_04450) yfhH 875734..876048 (+) 315 WP_003244592.1 YfhH family protein -
  P5647_RS04455 (P5647_04455) yfhI 876191..877384 (+) 1194 WP_003243500.1 MFS transporter -
  P5647_RS04460 (P5647_04460) sspK 877417..877569 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  P5647_RS04465 (P5647_04465) yfhJ 877694..877963 (+) 270 WP_003243789.1 YfhJ family protein -
  P5647_RS04470 (P5647_04470) yfhK 878108..878626 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  P5647_RS04475 (P5647_04475) spdL 878711..879043 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  P5647_RS04480 (P5647_04480) ephM 879030..879890 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=807107 P5647_RS04445 WP_003243354.1 874938..875732(+) (recX) [Bacillus subtilis strain DSM 1090]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=807107 P5647_RS04445 WP_003243354.1 874938..875732(+) (recX) [Bacillus subtilis strain DSM 1090]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1