Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   P5657_RS16725 Genome accession   NZ_CP120621
Coordinates   3173881..3174465 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain DSM 13019     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3168881..3179465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS16700 (P5657_16700) mobB 3169277..3169798 (-) 522 WP_049139878.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  P5657_RS16705 (P5657_16705) glp 3169759..3171051 (-) 1293 WP_014479672.1 gephyrin-like molybdotransferase Glp -
  P5657_RS16710 (P5657_16710) moeB 3171069..3172088 (-) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -
  P5657_RS16715 (P5657_16715) mobA 3172139..3172738 (-) 600 WP_087614541.1 molybdenum cofactor guanylyltransferase -
  P5657_RS16720 (P5657_16720) cse15 3172875..3173840 (+) 966 WP_021479381.1 spore protein Cse15 -
  P5657_RS16725 (P5657_16725) rok 3173881..3174465 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  P5657_RS16730 (P5657_16730) ykuV 3174931..3175377 (-) 447 WP_032725606.1 thiol-disulfide oxidoreductase YkuV -
  P5657_RS16735 (P5657_16735) ahpA 3175448..3175990 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  P5657_RS16740 (P5657_16740) mscT 3176227..3177030 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  P5657_RS16745 (P5657_16745) ykuS 3177067..3177312 (-) 246 WP_003232382.1 YkuS family protein -
  P5657_RS16750 (P5657_16750) dapI 3177374..3178498 (-) 1125 WP_134991531.1 N-acetyldiaminopimelate deacetylase -
  P5657_RS16755 (P5657_16755) dapD 3178568..3179278 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=807072 P5657_RS16725 WP_014113628.1 3173881..3174465(-) (rok) [Bacillus subtilis strain DSM 13019]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=807072 P5657_RS16725 WP_014113628.1 3173881..3174465(-) (rok) [Bacillus subtilis strain DSM 13019]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974