Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   P5649_RS02910 Genome accession   NZ_CP120613
Coordinates   579419..579817 (+) Length   132 a.a.
NCBI ID   WP_003246342.1    Uniprot ID   A0AAE2SGH7
Organism   Bacillus subtilis strain DSM 23521     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 574419..584817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS02885 (P5649_02885) hxlR 575152..575514 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  P5649_RS02890 (P5649_02890) hxlA 575748..576380 (+) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  P5649_RS02895 (P5649_02895) hxlB 576386..576943 (+) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  P5649_RS02900 (P5649_02900) tlpC 577054..578775 (+) 1722 WP_003246498.1 methyl-accepting chemotaxis protein TlpC -
  P5649_RS02905 (P5649_02905) nucA/comI 578943..579392 (+) 450 WP_003246436.1 DNA-entry nuclease Machinery gene
  P5649_RS02910 (P5649_02910) nin/comJ 579419..579817 (+) 399 WP_003246342.1 DNA-entry nuclease inhibitor Regulator
  P5649_RS02915 (P5649_02915) bglC 579854..581287 (-) 1434 WP_003246242.1 6-phospho-beta-glucosidase -
  P5649_RS02920 (P5649_02920) yckD 581441..581773 (-) 333 WP_003246247.1 YckD family protein -
  P5649_RS02925 (P5649_02925) yckC 581855..582310 (-) 456 WP_003246356.1 RDD family protein -
  P5649_RS02930 (P5649_02930) - 582329..582526 (-) 198 WP_119122841.1 hypothetical protein -
  P5649_RS02935 (P5649_02935) yckB 582688..583551 (+) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  P5649_RS02940 (P5649_02940) yckA 583561..584241 (+) 681 WP_003234624.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14996.95 Da        Isoelectric Point: 4.8991

>NTDB_id=806880 P5649_RS02910 WP_003246342.1 579419..579817(+) (nin/comJ) [Bacillus subtilis strain DSM 23521]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=806880 P5649_RS02910 WP_003246342.1 579419..579817(+) (nin/comJ) [Bacillus subtilis strain DSM 23521]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

100

100

1