Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   P5649_RS02870 Genome accession   NZ_CP120613
Coordinates   560526..560666 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain DSM 23521     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 555526..565666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS02865 (P5649_02865) - 559408..560580 (-) 1173 Protein_550 condensation domain-containing protein -
  P5649_RS02870 (P5649_02870) comS 560526..560666 (-) 141 WP_010886404.1 competence protein ComS Regulator
  P5649_RS02875 (P5649_02875) srfAB 560710..563802 (-) 3093 Protein_552 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=806878 P5649_RS02870 WP_010886404.1 560526..560666(-) (comS) [Bacillus subtilis strain DSM 23521]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=806878 P5649_RS02870 WP_010886404.1 560526..560666(-) (comS) [Bacillus subtilis strain DSM 23521]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1