Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5649_RS00160 Genome accession   NZ_CP120613
Coordinates   25106..25900 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain DSM 23521     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 20106..30900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS00125 (P5649_00125) ephM 20948..21808 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  P5649_RS00130 (P5649_00130) spdL 21795..22127 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  P5649_RS00135 (P5649_00135) yfhK 22212..22730 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  P5649_RS00140 (P5649_00140) yfhJ 22875..23144 (-) 270 WP_003243789.1 YfhJ family protein -
  P5649_RS00145 (P5649_00145) sspK 23269..23421 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  P5649_RS00150 (P5649_00150) yfhI 23454..24647 (-) 1194 WP_003243500.1 MFS transporter -
  P5649_RS00155 (P5649_00155) yfhH 24790..25104 (-) 315 WP_003244592.1 YfhH family protein -
  P5649_RS00160 (P5649_00160) recX 25106..25900 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  P5649_RS00165 (P5649_00165) yfhF 25989..26900 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  P5649_RS00170 (P5649_00170) yfhE 26955..27065 (+) 111 WP_003223230.1 YfhE family protein -
  P5649_RS00175 (P5649_00175) yfhD 27132..27323 (+) 192 WP_003233561.1 YfhD family protein -
  P5649_RS00180 (P5649_00180) yfhC 27362..27946 (-) 585 WP_003243940.1 nitroreductase -
  P5649_RS00185 (P5649_00185) yfhB 28034..28915 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  P5649_RS00190 (P5649_00190) sxzA 29030..30061 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=806868 P5649_RS00160 WP_003243354.1 25106..25900(-) (recX) [Bacillus subtilis strain DSM 23521]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=806868 P5649_RS00160 WP_003243354.1 25106..25900(-) (recX) [Bacillus subtilis strain DSM 23521]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1