Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P5636_RS02505 Genome accession   NZ_CP120609
Coordinates   457283..458233 (-) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium DSM 319     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 452283..463233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5636_RS02480 (P5636_02480) - 452640..453152 (-) 513 WP_013083943.1 DUF3231 family protein -
  P5636_RS02485 (P5636_02485) - 453338..454180 (-) 843 WP_013083944.1 manganese catalase family protein -
  P5636_RS02490 (P5636_02490) - 454611..455567 (-) 957 WP_013083945.1 siderophore ABC transporter substrate-binding protein -
  P5636_RS02495 (P5636_02495) - 455591..456349 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  P5636_RS02500 (P5636_02500) - 456343..457290 (-) 948 WP_013083946.1 iron chelate uptake ABC transporter family permease subunit -
  P5636_RS02505 (P5636_02505) ceuB 457283..458233 (-) 951 WP_013057891.1 ABC transporter permease Machinery gene
  P5636_RS02510 (P5636_02510) - 458632..459438 (-) 807 WP_013057892.1 cell wall hydrolase -
  P5636_RS02515 (P5636_02515) - 459801..460055 (+) 255 WP_013057893.1 hypothetical protein -
  P5636_RS02520 (P5636_02520) - 460131..460295 (-) 165 WP_013057894.1 hypothetical protein -
  P5636_RS02525 (P5636_02525) - 460621..461184 (-) 564 WP_013083947.1 NAD(P)H-dependent oxidoreductase -
  P5636_RS02530 (P5636_02530) lepB 461476..462036 (-) 561 WP_013083948.1 signal peptidase I -
  P5636_RS02535 (P5636_02535) - 462120..462476 (-) 357 WP_013083949.1 DUF4440 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=806744 P5636_RS02505 WP_013057891.1 457283..458233(-) (ceuB) [Priestia megaterium DSM 319]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=806744 P5636_RS02505 WP_013057891.1 457283..458233(-) (ceuB) [Priestia megaterium DSM 319]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCGCTAGTCGGTTTAATGCTCGGCAGTATTGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
TCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATTGTAAACATTGGATTGGTCATTGTGTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTGGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5