Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   P5661_RS16965 Genome accession   NZ_CP120600
Coordinates   3191881..3194199 (-) Length   772 a.a.
NCBI ID   WP_161621287.1    Uniprot ID   -
Organism   Bacillus subtilis strain PRO112     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3186881..3199199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5661_RS16925 (P5661_16925) mrpB 3187347..3187778 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  P5661_RS16930 (P5661_16930) mrpC 3187778..3188119 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  P5661_RS16935 (P5661_16935) mrpD 3188112..3189593 (+) 1482 WP_041850587.1 Na+/H+ antiporter subunit D -
  P5661_RS16940 (P5661_16940) mrpE 3189599..3190075 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  P5661_RS16945 (P5661_16945) mrpF 3190075..3190359 (+) 285 WP_277709714.1 Na(+)/H(+) antiporter subunit F1 -
  P5661_RS16950 (P5661_16950) mnhG 3190343..3190717 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  P5661_RS16955 (P5661_16955) yuxO 3190756..3191136 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  P5661_RS16960 (P5661_16960) comA 3191155..3191800 (-) 646 Protein_3271 two-component system response regulator ComA -
  P5661_RS16965 (P5661_16965) comP 3191881..3194199 (-) 2319 WP_161621287.1 sensor histidine kinase Regulator
  P5661_RS16970 (P5661_16970) comX 3194219..3194395 (-) 177 WP_041906074.1 competence pheromone ComX -
  P5661_RS16975 (P5661_16975) - 3194410..3195267 (-) 858 WP_309248341.1 polyprenyl synthetase family protein -
  P5661_RS16980 (P5661_16980) degQ 3195434..3195574 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  P5661_RS16985 (P5661_16985) - 3195796..3195921 (+) 126 WP_161621781.1 hypothetical protein -
  P5661_RS16990 (P5661_16990) - 3196037..3196405 (+) 369 WP_017695529.1 hypothetical protein -
  P5661_RS16995 (P5661_16995) pdeH 3196381..3197610 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 772 a.a.        Molecular weight: 90001.35 Da        Isoelectric Point: 8.6883

>NTDB_id=806598 P5661_RS16965 WP_161621287.1 3191881..3194199(-) (comP) [Bacillus subtilis strain PRO112]
MKNLKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHELKVEKMTKATYGKYMGLKEGDLILEVSGKKPTSENV
KRNYLAKAEHLKVKRDNHEIQLHNTEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYIVNILYTLPIINVIIEFIQKYLPSGIITNIS
NINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISNTVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLAL
VYQFVVNKIYDIDFILGRIRYYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRFS
EKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDKQSVEPNWRLYKTEFEKVTKEIG
KIIEINQGFLIKVGEKGTSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVVQIEELMDHLQALKREGANPVWLK
KLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQL
LYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYE
DDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2319 bp        

>NTDB_id=806598 P5661_RS16965 WP_161621287.1 3191881..3194199(-) (comP) [Bacillus subtilis strain PRO112]
TTGAAAAACCTTAAAAGAAATTTTTCTATAGTGCTAGTATTATTTAGTCTCTTATATTTTGCTTATATTGTTTATTTCAC
TCAGAATGGTATCTTAGTTGGTACTTATGTTTCTGAAACAGCCAATCATGAGTTAAAAGTTGAAAAAATGACTAAAGCCA
CATATGGAAAATATATGGGCTTAAAAGAAGGCGACTTAATACTCGAGGTAAGTGGGAAGAAACCTACAAGCGAGAATGTT
AAAAGAAATTATTTAGCAAAAGCTGAACATTTAAAAGTTAAAAGGGATAATCATGAAATTCAATTACATAATACGGAGTA
TATCTCTTTAAATAATTCTTATAGCTTTTTCATTTATATTATCCCTTGTATATTTTTTGCTTTGAGTCTGTTATGTGCAT
TTTATATTTATAGGGTCAATCGAGTAAAAAATACGTACTCGGCTTATATTTTGATTAATTTTTTGCTGTTTATATCTATA
GCATATTTAAGTGCTGGAGGCGTAACTAGAGGATATGAAATAAATAGATATATTAATCTTTTTACCTTTTTAAATGTACC
TGTCTTGTATTTGCATTTTCTATATCAATATTTCAAAGAATTAAGCATCAAATTTTCATCACGTTATATCGTGAATATTT
TATACACGTTGCCAATTATCAATGTAATAATAGAGTTCATCCAGAAATACCTTCCTTCGGGGATTATTACGAATATTAGT
AATATCAATTTAGTAACATTCTTAATAGAGATTACAGTTGTTTATTTTTGCATTATCTATTATGGGATAATTTATAGAAA
AAAGGATCATTATTATTTGTTGAAGGTATTATTGATTTCAAATACGGTAGCTTTCTTTCCTTTTACGGTCTTATATATCA
TGCCGGAAGTTTTATTTGGGCAATATATTTACTCAGCAATAGTGACTGCACCATTCTTAATAATTATCCCATTAGCATTG
GTTTATCAATTCGTTGTAAATAAAATTTATGATATAGACTTTATACTAGGCAGAATTAGATATTATAGTTTATTATCCAT
CATACCAACAATAGGCATAGTATGGTTGTCAATAATATTTGATAGCAAAAGAGCGGATTTTAATATCATCTTAATTACGT
TATGTACTTTCATAATTTTCCTGTCGGTCTTTTATATTAAAGAATTACTGGACTATAAATTTCGGTTAAAACGATTTTCG
GAAAAATATAATTATCAAGACAGTATATTTAAATATACGCAATTAATTAAAGGTGTATCAGCTTTAGATCAAGTATTTAA
GAACTTAAAAACAACAATACTAGAAGTTCTACCCGTAAGTAAAGCCTACATCTTTGAAGTTGGTGCTGATAGAGAAATCA
TATACTTTGATAAACAGAGTGTTGAACCCAACTGGAGGCTGTATAAAACAGAATTTGAAAAGGTCACTAAAGAAATAGGG
AAGATTATTGAGATTAACCAAGGCTTTTTGATCAAAGTAGGGGAAAAAGGTACGAGTTCTTATGTATTGCTTTGTTTATC
TAGCATCAATACACCAAGGTTGACAAGAGATGAAATTTCATGGCTGAAAACATTATCGTTTTATACTAGTGTATCCATGG
AAAATGTTGTACAAATTGAAGAACTCATGGATCATTTACAAGCTTTAAAAAGGGAAGGTGCCAACCCCGTATGGCTCAAA
AAACTCATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGAT
TTCCTTAAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGATGACAATCCGTGCCGTGAAGAGGTGCAGGACA
AGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTT
CTGTATGATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTT
AAATACCGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTA
ATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAG
GATGATGGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGT
CAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

64.424

100

0.645