Detailed information NTG0806558

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: P5661_RS05990
• Genome accession: NZ_CP120600
• Coordinates: 1160624..1161577 (+)
• Length: 317 a.a.
• NCBI ID: WP_277709402.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PRO112
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1155624..1166577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5661_RS05965 (P5661_05965)	argF	1157456..1158415 (+)	960	WP_277709401.1	ornithine carbamoyltransferase	-
P5661_RS05970 (P5661_05970)	yjzC	1158501..1158680 (+)	180	WP_003245356.1	YjzC family protein	-
P5661_RS05975 (P5661_05975)	yjzD	1158726..1158911 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
P5661_RS05980 (P5661_05980)	-	1159160..1159894 (+)	735	WP_032721340.1	hypothetical protein	-
P5661_RS05985 (P5661_05985)	-	1159976..1160533 (+)	558	WP_021479559.1	hypothetical protein	-
P5661_RS05990 (P5661_05990)	med	1160624..1161577 (+)	954	WP_277709402.1	transcriptional regulator Med	Regulator
P5661_RS05995 (P5661_05995)	comZ	1161592..1161783 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
P5661_RS06000 (P5661_06000)	yjzB	1161813..1162049 (-)	237	WP_072173825.1	spore coat protein YjzB	-
P5661_RS06005 (P5661_06005)	fabH	1162214..1163152 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
P5661_RS06010 (P5661_06010)	fabF	1163175..1164416 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
P5661_RS06015 (P5661_06015)	yjaZ	1164492..1165277 (+)	786	WP_049140720.1	DUF2268 domain-containing protein	-
P5661_RS06020 (P5661_06020)	appD	1165469..1166455 (+)	987	WP_049140721.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35252.80 Da
• Isoelectric Point: 4.6556

>NTDB_id=806558 P5661_RS05990 WP_277709402.1 1160624..1161577(+) (med) [Bacillus subtilis strain PRO112]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEGIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=806558 P5661_RS05990 WP_277709402.1 1160624..1161577(+) (med) [Bacillus subtilis strain PRO112]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGGTATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994