Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5661_RS04455 Genome accession   NZ_CP120600
Coordinates   878344..879138 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain PRO112     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 873344..884138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5661_RS04425 (P5661_04425) sxzA 874182..875213 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  P5661_RS04430 (P5661_04430) yfhB 875328..876209 (+) 882 WP_277709349.1 PhzF family phenazine biosynthesis isomerase -
  P5661_RS04435 (P5661_04435) yfhC 876297..876881 (+) 585 WP_032723010.1 nitroreductase -
  P5661_RS04440 (P5661_04440) yfhD 876921..877112 (-) 192 WP_003233561.1 YfhD family protein -
  P5661_RS04445 (P5661_04445) yfhE 877179..877289 (-) 111 WP_003223230.1 YfhE family protein -
  P5661_RS04450 (P5661_04450) yfhF 877344..878255 (-) 912 WP_264240363.1 TIGR01777 family oxidoreductase -
  P5661_RS04455 (P5661_04455) recX 878344..879138 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  P5661_RS04460 (P5661_04460) yfhH 879140..879454 (+) 315 WP_003244592.1 YfhH family protein -
  P5661_RS04465 (P5661_04465) yfhI 879597..880790 (+) 1194 WP_021481165.1 MFS transporter -
  P5661_RS04470 (P5661_04470) sspK 880822..880974 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  P5661_RS04475 (P5661_04475) yfhJ 881099..881368 (+) 270 WP_003243789.1 YfhJ family protein -
  P5661_RS04480 (P5661_04480) yfhK 881512..882030 (+) 519 WP_085187167.1 SH3 domain-containing protein -
  P5661_RS04485 (P5661_04485) spdL 882115..882432 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  P5661_RS04490 (P5661_04490) ephM 882434..883294 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=806550 P5661_RS04455 WP_003243354.1 878344..879138(+) (recX) [Bacillus subtilis strain PRO112]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=806550 P5661_RS04455 WP_003243354.1 878344..879138(+) (recX) [Bacillus subtilis strain PRO112]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1