Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5638_RS17905 Genome accession   NZ_CP120599
Coordinates   3484569..3485360 (-) Length   263 a.a.
NCBI ID   WP_277722255.1    Uniprot ID   -
Organism   Bacillus safensis strain PRO114     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3479569..3490360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5638_RS17880 (P5638_17880) - 3482207..3483190 (-) 984 WP_024425218.1 glycosyltransferase family 2 protein -
  P5638_RS17885 (P5638_17885) - 3483490..3483762 (-) 273 WP_024425219.1 YfhJ family protein -
  P5638_RS17890 (P5638_17890) - 3483879..3484028 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  P5638_RS17895 (P5638_17895) - 3484054..3484227 (+) 174 WP_008360604.1 YpzG family protein -
  P5638_RS17900 (P5638_17900) - 3484251..3484565 (-) 315 WP_041087336.1 YfhH family protein -
  P5638_RS17905 (P5638_17905) recX 3484569..3485360 (-) 792 WP_277722255.1 recombination regulator RecX Regulator
  P5638_RS17910 (P5638_17910) - 3485455..3486351 (+) 897 WP_103132711.1 TIGR01777 family oxidoreductase -
  P5638_RS17915 (P5638_17915) - 3486404..3486514 (+) 111 WP_017358836.1 YfhE family protein -
  P5638_RS17920 (P5638_17920) - 3486576..3486731 (+) 156 WP_024425223.1 YfhD family protein -
  P5638_RS17925 (P5638_17925) - 3486770..3487357 (-) 588 WP_212052899.1 nitroreductase -
  P5638_RS17930 (P5638_17930) - 3487632..3488888 (+) 1257 WP_024425225.1 transcriptional regulator -
  P5638_RS17935 (P5638_17935) - 3488925..3489392 (-) 468 WP_024425226.1 DUF393 domain-containing protein -
  P5638_RS17940 (P5638_17940) - 3489726..3490274 (-) 549 WP_024425227.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30639.08 Da        Isoelectric Point: 6.6682

>NTDB_id=806538 P5638_RS17905 WP_277722255.1 3484569..3485360(-) (recX) [Bacillus safensis strain PRO114]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPATAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=806538 P5638_RS17905 WP_277722255.1 3484569..3485360(-) (recX) [Bacillus safensis strain PRO114]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCAACTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCCTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTATCCCAATACCCTGATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635