Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5622_RS20205 Genome accession   NZ_CP120598
Coordinates   3854342..3855136 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain PRO115     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3849342..3860136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS20170 (P5622_20170) ephM 3850184..3851044 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  P5622_RS20175 (P5622_20175) spdL 3851031..3851363 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  P5622_RS20180 (P5622_20180) yfhK 3851448..3851966 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  P5622_RS20185 (P5622_20185) yfhJ 3852111..3852380 (-) 270 WP_003243789.1 YfhJ family protein -
  P5622_RS20190 (P5622_20190) sspK 3852505..3852657 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  P5622_RS20195 (P5622_20195) yfhI 3852690..3853883 (-) 1194 WP_003243500.1 MFS transporter -
  P5622_RS20200 (P5622_20200) yfhH 3854026..3854340 (-) 315 WP_003244592.1 YfhH family protein -
  P5622_RS20205 (P5622_20205) recX 3854342..3855136 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  P5622_RS20210 (P5622_20210) yfhF 3855225..3856136 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  P5622_RS20215 (P5622_20215) yfhE 3856191..3856301 (+) 111 WP_003223230.1 YfhE family protein -
  P5622_RS20220 (P5622_20220) yfhD 3856368..3856559 (+) 192 WP_003233561.1 YfhD family protein -
  P5622_RS20225 (P5622_20225) yfhC 3856598..3857182 (-) 585 WP_003243940.1 nitroreductase -
  P5622_RS20230 (P5622_20230) yfhB 3857270..3858151 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  P5622_RS20235 (P5622_20235) sxzA 3858266..3859297 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=806474 P5622_RS20205 WP_003243354.1 3854342..3855136(-) (recX) [Bacillus subtilis strain PRO115]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=806474 P5622_RS20205 WP_003243354.1 3854342..3855136(-) (recX) [Bacillus subtilis strain PRO115]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1