Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   P5622_RS01230 Genome accession   NZ_CP120598
Coordinates   228700..228840 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain PRO115     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 223700..233840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS01225 (P5622_01225) - 227582..228754 (-) 1173 Protein_233 condensation domain-containing protein -
  P5622_RS01230 (P5622_01230) comS 228700..228840 (-) 141 WP_010886404.1 competence protein ComS Regulator
  P5622_RS01235 (P5622_01235) - 228932..229069 (-) 138 Protein_235 phosphopantetheine-binding protein -
  P5622_RS01240 (P5622_01240) - 229005..231977 (-) 2973 WP_277715563.1 non-ribosomal peptide synthetase -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=806405 P5622_RS01230 WP_010886404.1 228700..228840(-) (comS) [Bacillus subtilis strain PRO115]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=806405 P5622_RS01230 WP_010886404.1 228700..228840(-) (comS) [Bacillus subtilis strain PRO115]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1