Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   P5663_RS19605 Genome accession   NZ_CP120590
Coordinates   3698640..3698834 (-) Length   64 a.a.
NCBI ID   WP_025908161.1    Uniprot ID   A0A0V8JM81
Organism   Priestia flexa strain PRO116     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 3697945..3698517 3698640..3698834 flank 123


Gene organization within MGE regions


Location: 3697945..3698834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5663_RS19605 (P5663_19615) comZ 3698640..3698834 (-) 195 WP_025908161.1 ComZ family protein Regulator

Sequence


Protein


Download         Length: 64 a.a.        Molecular weight: 7415.62 Da        Isoelectric Point: 4.2259

>NTDB_id=806396 P5663_RS19605 WP_025908161.1 3698640..3698834(-) (comZ) [Priestia flexa strain PRO116]
MMEQQMQFMQIAMKYLPEAKEILDQTGVELSMEHVQPVLGLLTKVMNDAYELGKEDALKEQNEK

Nucleotide


Download         Length: 195 bp        

>NTDB_id=806396 P5663_RS19605 WP_025908161.1 3698640..3698834(-) (comZ) [Priestia flexa strain PRO116]
ATGATGGAACAACAAATGCAGTTTATGCAAATCGCAATGAAGTATTTACCAGAAGCAAAAGAGATTTTAGATCAAACAGG
CGTAGAGCTTTCTATGGAGCACGTTCAGCCAGTTTTAGGGCTTTTAACAAAAGTAATGAATGATGCTTATGAACTTGGTA
AAGAAGATGCGTTAAAAGAGCAGAATGAAAAATAA

Domains


Predicted by InterproScan.

(3-57)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0V8JM81

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

62.069

90.625

0.563