Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   P5628_RS07805 Genome accession   NZ_CP120577
Coordinates   1474641..1475105 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain PRO53     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469641..1480105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS07785 (P5628_07785) kinA 1470107..1471928 (+) 1822 Protein_1477 sporulation histidine kinase KinA -
  P5628_RS07790 (P5628_07790) dapX 1471938..1473119 (-) 1182 WP_101502064.1 aminotransferase A -
  P5628_RS07795 (P5628_07795) - 1473321..1473482 (-) 162 WP_014476654.1 hypothetical protein -
  P5628_RS07800 (P5628_07800) cheV 1473686..1474597 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  P5628_RS07805 (P5628_07805) kre 1474641..1475105 (-) 465 WP_003232406.1 YkyB family protein Regulator
  P5628_RS07810 (P5628_07810) ykuC 1475231..1476523 (-) 1293 WP_277709563.1 MFS transporter -
  P5628_RS07815 (P5628_07815) ltdD 1476599..1477093 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  P5628_RS07820 (P5628_07820) ppeE 1477150..1478010 (-) 861 WP_003232400.1 metallophosphoesterase -
  P5628_RS07825 (P5628_07825) fadH 1478153..1478917 (+) 765 WP_249852669.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=806295 P5628_RS07805 WP_003232406.1 1474641..1475105(-) (kre) [Bacillus subtilis strain PRO53]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=806295 P5628_RS07805 WP_003232406.1 1474641..1475105(-) (kre) [Bacillus subtilis strain PRO53]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1