Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   P5628_RS06085 Genome accession   NZ_CP120577
Coordinates   1179331..1179987 (+) Length   218 a.a.
NCBI ID   WP_003239278.1    Uniprot ID   -
Organism   Bacillus subtilis strain PRO53     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1174331..1184987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS06055 (P5628_06055) oppF 1174794..1175711 (+) 918 WP_003239287.1 oligopeptide ABC transporter ATP-binding protein OppF -
  P5628_RS06060 (P5628_06060) yjbB 1175818..1177035 (+) 1218 WP_072175656.1 MFS transporter -
  P5628_RS06065 (P5628_06065) yjbC 1177198..1177776 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  P5628_RS06070 (P5628_06070) spx 1177957..1178352 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  P5628_RS06075 (P5628_06075) yjbE 1178398..1179054 (-) 657 WP_003232944.1 TerC family protein -
  P5628_RS06080 (P5628_06080) - 1179224..1179364 (+) 141 WP_119122854.1 hypothetical protein -
  P5628_RS06085 (P5628_06085) mecA 1179331..1179987 (+) 657 WP_003239278.1 adaptor protein MecA Regulator
  P5628_RS06090 (P5628_06090) - 1179982..1180104 (-) 123 WP_021479547.1 hypothetical protein -
  P5628_RS06095 (P5628_06095) coiA 1180148..1181299 (+) 1152 WP_043857280.1 competence protein CoiA Machinery gene
  P5628_RS06100 (P5628_06100) pepF 1181500..1183359 (+) 1860 WP_252360566.1 oligoendopeptidase F -
  P5628_RS06105 (P5628_06105) - 1183397..1183564 (-) 168 WP_003244944.1 hypothetical protein -
  P5628_RS06110 (P5628_06110) spxH 1183879..1184778 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25776.69 Da        Isoelectric Point: 4.1174

>NTDB_id=806290 P5628_RS06085 WP_003239278.1 1179331..1179987(+) (mecA) [Bacillus subtilis strain PRO53]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=806290 P5628_RS06085 WP_003239278.1 1179331..1179987(+) (mecA) [Bacillus subtilis strain PRO53]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995