Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P5628_RS04430 Genome accession   NZ_CP120577
Coordinates   874612..875406 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain PRO53     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 869612..880406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS04400 (P5628_04400) sxzA 870451..871482 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  P5628_RS04405 (P5628_04405) yfhB 871597..872478 (+) 882 WP_277709349.1 PhzF family phenazine biosynthesis isomerase -
  P5628_RS04410 (P5628_04410) yfhC 872566..873150 (+) 585 WP_032723010.1 nitroreductase -
  P5628_RS04415 (P5628_04415) yfhD 873189..873380 (-) 192 WP_003233561.1 YfhD family protein -
  P5628_RS04420 (P5628_04420) yfhE 873447..873557 (-) 111 WP_003223230.1 YfhE family protein -
  P5628_RS04425 (P5628_04425) yfhF 873612..874523 (-) 912 WP_264240363.1 TIGR01777 family oxidoreductase -
  P5628_RS04430 (P5628_04430) recX 874612..875406 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  P5628_RS04435 (P5628_04435) yfhH 875408..875722 (+) 315 WP_003244592.1 YfhH family protein -
  P5628_RS04440 (P5628_04440) yfhI 875865..877058 (+) 1194 WP_021481165.1 MFS transporter -
  P5628_RS04445 (P5628_04445) sspK 877090..877242 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  P5628_RS04450 (P5628_04450) yfhJ 877367..877636 (+) 270 WP_003243789.1 YfhJ family protein -
  P5628_RS04455 (P5628_04455) yfhK 877780..878298 (+) 519 WP_085187167.1 SH3 domain-containing protein -
  P5628_RS04460 (P5628_04460) spdL 878383..878700 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  P5628_RS04465 (P5628_04465) ephM 878702..879562 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=806278 P5628_RS04430 WP_003243354.1 874612..875406(+) (recX) [Bacillus subtilis strain PRO53]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=806278 P5628_RS04430 WP_003243354.1 874612..875406(+) (recX) [Bacillus subtilis strain PRO53]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1