Detailed information NTG0080617

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: L6491_RS26120
• Genome accession: NZ_AP023000
• Coordinates: 5011694..5013043 (-)
• Length: 449 a.a.
• NCBI ID: WP_236787299.1
• Uniprot ID: -
• Organism: Bacillus cereus strain 30077
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5006694..5018043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6491_RS26100 (BC30077_5172)	secA	5007016..5009523 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
L6491_RS26105 (BC30077_5173)	raiA	5009800..5010342 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
L6491_RS26110 (BC30077_5174)	cspC	5010666..5010863 (-)	198	WP_033656419.1	cold shock protein CspC	-
L6491_RS26115 (BC30077_5175)	comFC	5010990..5011694 (-)	705	WP_062921932.1	comF operon protein ComFC	-
L6491_RS26120 (BC30077_5176)	comFA	5011694..5013043 (-)	1350	WP_236787299.1	ATP-dependent helicase ComFA	Machinery gene
L6491_RS26125 (BC30077_5177)	-	5013171..5014599 (-)	1429	Protein_5101	NlpC/P60 family protein	-
L6491_RS26130 (BC30077_5178)	-	5014747..5015061 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
L6491_RS26135 (BC30077_5179)	-	5015235..5016077 (-)	843	WP_236787300.1	DegV family protein	-
L6491_RS26140 (BC30077_5180)	-	5016317..5016952 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51305.95 Da
• Isoelectric Point: 9.5085

>NTDB_id=80617 L6491_RS26120 WP_236787299.1 5011694..5013043(-) (comFA) [Bacillus cereus strain 30077]
MVAGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGIIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KERAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEISLLLKELDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=80617 L6491_RS26120 WP_236787299.1 5011694..5013043(-) (comFA) [Bacillus cereus strain 30077]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTATTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAGAGCGGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGTAATTGGAAGAAAA
GCCTTCACCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGCCTGTTATTGAAAGAGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.675	93.096	0.481