Detailed information NTG0805961

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: P3L57_RS18690
• Genome accession: NZ_CP120511
• Coordinates: 3746639..3747784 (+)
• Length: 381 a.a.
• NCBI ID: WP_069486780.1
• Uniprot ID: -
• Organism: Bacillus sp. B28
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3741639..3752784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3L57_RS18670 (P3L57_18670)	-	3742523..3743800 (+)	1278	WP_069486781.1	pitrilysin family protein	-
P3L57_RS18675 (P3L57_18675)	-	3743797..3744498 (+)	702	WP_044159813.1	hypothetical protein	-
P3L57_RS18680 (P3L57_18680)	-	3744505..3744859 (-)	355	Protein_3623	YncE family protein	-
P3L57_RS18685 (P3L57_18685)	-	3745052..3746410 (-)	1359	WP_059335160.1	YncE family protein	-
P3L57_RS18690 (P3L57_18690)	rapF	3746639..3747784 (+)	1146	WP_069486780.1	tetratricopeptide repeat protein	Regulator
P3L57_RS18695 (P3L57_18695)	-	3747768..3747887 (+)	120	WP_024123223.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
P3L57_RS18700 (P3L57_18700)	speB	3747993..3748865 (-)	873	WP_069486779.1	agmatinase	-
P3L57_RS18705 (P3L57_18705)	speE	3748926..3749756 (-)	831	WP_044159821.1	spermidine synthase	-
P3L57_RS18710 (P3L57_18710)	-	3749957..3752032 (+)	2076	WP_069486778.1	transglycosylase domain-containing protein	-
P3L57_RS18715 (P3L57_18715)	-	3752365..3752610 (-)	246	WP_241496922.1	AMP-binding protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45560.09 Da
• Isoelectric Point: 4.7478

>NTDB_id=805961 P3L57_RS18690 WP_069486780.1 3746639..3747784(+) (rapF) [Bacillus sp. B28]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLENMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYILAIQFFKKAESKLTFVTDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYNEQTTYDIRMIQCQSLFGANFLDLKQYDKAIAHFQKAYTLAEAAQQPQLMGRTLYNIALCKQNQHSLES
AIEYVKKSIHVFEESKMLPSLPQAFFLITQIYFKLGKIDNACEYHIKGREYSIAAGDTVYLMEFEFLESLYLSGPDEEAI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASTYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=805961 P3L57_RS18690 WP_069486780.1 3746639..3747784(+) (rapF) [Bacillus sp. B28]
GTGACAAGTGTCATATCTTCTTCTTCCGTTGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
GGATGCGGAATATTTACGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAACATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGTTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTACTTTAATTTCTTCAG
AGGTATGTACGAACTGGATCGCCGGGAATATATATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGACTTTTG
TGACAGATAAAATTGATAAAGCTGAGTTCTTTTTCAAAATGTCAGAAGTTTATTACTATATGAAGCAAACTTATGTGTCC
ATGGACTATGCACGTCAAGCCTTTGAAATATACAATGAACAAACTACATATGATATCAGAATGATTCAATGCCAATCCCT
GTTTGGAGCTAACTTTTTGGATCTGAAACAGTATGATAAAGCAATTGCCCATTTCCAAAAAGCTTATACACTTGCTGAGG
CGGCACAGCAGCCGCAGCTAATGGGAAGAACGCTTTATAATATTGCACTTTGCAAGCAAAACCAACACAGTCTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCATGTATTTGAAGAATCGAAAATGCTTCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGCAAGATTGATAACGCTTGTGAATATCATATTAAAGGAAGAGAATATTCAATAG
CTGCCGGAGACACTGTGTACTTAATGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCTGATGAAGAAGCAATA
GAAAAATGTTTTGTTTTCCTTGAAAGTAAAATGATGTATGCTGATATTGAAGACTTTGCACTCGATGTTGCTAAGTATTA
TCATCAGCAGGAAAATTACAAAAAAGCATCTACTTATTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (189-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	79.79	100	0.798
rapC	Bacillus subtilis subsp. subtilis str. 168	56.842	99.738	0.567