Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   P3L57_RS15715 Genome accession   NZ_CP120511
Coordinates   3143912..3144556 (-) Length   214 a.a.
NCBI ID   WP_024122680.1    Uniprot ID   A0A9Q6AB41
Organism   Bacillus sp. B28     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3138912..3149556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L57_RS15680 (P3L57_15680) - 3140105..3140536 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  P3L57_RS15685 (P3L57_15685) - 3140536..3140877 (+) 342 WP_044158938.1 Na(+)/H(+) antiporter subunit C -
  P3L57_RS15690 (P3L57_15690) - 3140870..3142351 (+) 1482 WP_069486983.1 Na+/H+ antiporter subunit D -
  P3L57_RS15695 (P3L57_15695) - 3142357..3142833 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  P3L57_RS15700 (P3L57_15700) - 3142833..3143117 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  P3L57_RS15705 (P3L57_15705) mnhG 3143101..3143475 (+) 375 WP_059292644.1 monovalent cation/H(+) antiporter subunit G -
  P3L57_RS15710 (P3L57_15710) - 3143514..3143894 (-) 381 WP_069486982.1 hotdog fold thioesterase -
  P3L57_RS15715 (P3L57_15715) comA 3143912..3144556 (-) 645 WP_024122680.1 two-component system response regulator ComA Regulator
  P3L57_RS15720 (P3L57_15720) comP 3144637..3146955 (-) 2319 WP_069486981.1 sensor histidine kinase Regulator
  P3L57_RS15725 (P3L57_15725) comX 3146975..3147151 (-) 177 WP_041906074.1 competence pheromone ComX -
  P3L57_RS15730 (P3L57_15730) - 3147166..3148059 (-) 894 WP_306481639.1 polyprenyl synthetase family protein -
  P3L57_RS15735 (P3L57_15735) degQ 3148190..3148330 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  P3L57_RS15740 (P3L57_15740) - 3148791..3149159 (+) 369 WP_044158947.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24109.42 Da        Isoelectric Point: 4.6730

>NTDB_id=805949 P3L57_RS15715 WP_024122680.1 3143912..3144556(-) (comA) [Bacillus sp. B28]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIHQHDFSSYDLILMDLNLGGDVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGDILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=805949 P3L57_RS15715 WP_024122680.1 3143912..3144556(-) (comA) [Bacillus sp. B28]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCCAGCGAACAGTTCATACACCAGCATGATTTCTCATCATATGATCTCATCTTAA
TGGATTTGAACTTAGGCGGCGATGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTATATACCGGTTATGAGGTCGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGCGCCATCAGCAAAAC
CGAATCAAAGGAAAAGATCACCCAATACATATATCACGTGCTCAACGGAGACATTTTAGTCGATTTCGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCCCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCAAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAAGGTTTTACCAACCAAGAAATTGCAGATGCGCTTCATTTAAGCAAGCGGTCCATCGAATA
CAGCCTGACGTCGATTTTCAACAAGCTTAATGTCGGTTCCAGGACGGAAGCGGTGTTGATTGCAAAATCAGACGGTGTGC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

98.598

100

0.986