Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   P3L57_RS06190 Genome accession   NZ_CP120511
Coordinates   1259730..1260881 (+) Length   383 a.a.
NCBI ID   WP_069486377.1    Uniprot ID   -
Organism   Bacillus sp. B28     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1254730..1265881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L57_RS06160 (P3L57_06160) - 1255398..1256615 (+) 1218 WP_083244451.1 MFS transporter -
  P3L57_RS06165 (P3L57_06165) - 1256783..1257361 (+) 579 WP_059293039.1 GNAT family N-acetyltransferase -
  P3L57_RS06170 (P3L57_06170) spx 1257540..1257935 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  P3L57_RS06175 (P3L57_06175) - 1257981..1258637 (-) 657 WP_044156385.1 TerC family protein -
  P3L57_RS06180 (P3L57_06180) - 1258824..1258949 (+) 126 WP_120698858.1 hypothetical protein -
  P3L57_RS06185 (P3L57_06185) mecA 1258916..1259572 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  P3L57_RS06190 (P3L57_06190) coiA 1259730..1260881 (+) 1152 WP_069486377.1 competence protein CoiA family protein Machinery gene
  P3L57_RS06195 (P3L57_06195) pepF 1261111..1262940 (+) 1830 WP_175422395.1 oligoendopeptidase F -
  P3L57_RS06200 (P3L57_06200) - 1262976..1263143 (-) 168 WP_024120925.1 hypothetical protein -
  P3L57_RS06205 (P3L57_06205) spxH 1263457..1264356 (-) 900 WP_069486380.1 protease adaptor protein SpxH -
  P3L57_RS06210 (P3L57_06210) - 1264353..1264751 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  P3L57_RS06215 (P3L57_06215) - 1265008..1265739 (-) 732 WP_264798362.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44857.98 Da        Isoelectric Point: 9.7675

>NTDB_id=805912 P3L57_RS06190 WP_069486377.1 1259730..1260881(+) (coiA) [Bacillus sp. B28]
MFSAVTEDGQVFHLIGRQRREQLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGMIPQWILGGSRLKRTSSSFYQLSDF
HWQFINASPNSDLLCYCPEIHSFLRLSRMIPFYTTHFYCSVQTIPIRQATAEDLFFTEPDSSFKHSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRQTPLSFLPTEVFVPVKKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRDQDFIEAVKQYIEFLCKKGFLRETQKEVYVLDQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=805912 P3L57_RS06190 WP_069486377.1 1259730..1260881(+) (coiA) [Bacillus sp. B28]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTCATAGGCAGGCAGAGGAGAGAACAATTAAAGCAGACCAG
GTTTTTCTGCCCGGTGTGTGCTGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAAAGGCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCAGTGGATTCTTGGAGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGATTTC
CATTGGCAGTTTATCAATGCCAGTCCGAACAGTGATCTGTTATGTTACTGCCCCGAAATACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAATCCGCCAGGCAACGGCTGAAGATT
TATTTTTCACTGAACCAGATTCGTCGTTTAAGCACTCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCAAACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGAGCTGTTTTTAAGAGTCCAGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATATAAACATGCGCCCATTCGCTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTCTGCTAAGAGGCGTATACAGGGATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTGTATGTGCTGGATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.603

97.389

0.736