Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   P3L57_RS06070 Genome accession   NZ_CP120511
Coordinates   1236479..1237432 (+) Length   317 a.a.
NCBI ID   WP_059336277.1    Uniprot ID   -
Organism   Bacillus sp. B28     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1231479..1242432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L57_RS06045 (P3L57_06045) argF 1233279..1234235 (+) 957 WP_069486372.1 ornithine carbamoyltransferase -
  P3L57_RS06050 (P3L57_06050) - 1234337..1234516 (+) 180 WP_003239319.1 YjzC family protein -
  P3L57_RS06055 (P3L57_06055) - 1234562..1234747 (-) 186 WP_010333727.1 YjzD family protein -
  P3L57_RS06060 (P3L57_06060) - 1235005..1235742 (+) 738 WP_059352722.1 hypothetical protein -
  P3L57_RS06065 (P3L57_06065) - 1235825..1236388 (+) 564 WP_044156403.1 hypothetical protein -
  P3L57_RS06070 (P3L57_06070) med 1236479..1237432 (+) 954 WP_059336277.1 BMP family ABC transporter substrate-binding protein Regulator
  P3L57_RS06075 (P3L57_06075) comZ 1237447..1237638 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  P3L57_RS06080 (P3L57_06080) - 1237668..1237898 (-) 231 WP_083244450.1 hypothetical protein -
  P3L57_RS06085 (P3L57_06085) fabH 1238064..1239002 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  P3L57_RS06090 (P3L57_06090) fabF 1239025..1240263 (+) 1239 WP_024120905.1 beta-ketoacyl-ACP synthase II -
  P3L57_RS06095 (P3L57_06095) - 1240343..1241128 (+) 786 WP_044156399.1 DUF2268 domain-containing protein -
  P3L57_RS06100 (P3L57_06100) appD 1241319..1242305 (+) 987 WP_044156398.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35258.88 Da        Isoelectric Point: 4.8692

>NTDB_id=805907 P3L57_RS06070 WP_059336277.1 1236479..1237432(+) (med) [Bacillus sp. B28]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSTYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAFQKKIAKLVKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=805907 P3L57_RS06070 WP_059336277.1 1236479..1237432(+) (med) [Bacillus sp. B28]
TTGATCACTAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTACATACAATGTGGACGTCTACTATAAAGAAGGCGTGAAAACAGATGAAGATATTATAAATGCGATTGAAGAT
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGCCATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTGAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAACGCAAAAGCAAAAGCGGACAATGTCACAAGCGTCCATCTCAGCGGGGAAGCTA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTTGACGGCTTTATAAAAGGGGCTAAGTATGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAGAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
CACTTTAAAAGGCGGCGACCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACTTTCAGTCCGCTTGTAGACA
AAGCCTTTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

93.06

100

0.931