Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   P3L57_RS02035 Genome accession   NZ_CP120511
Coordinates   392302..392442 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus sp. B28     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 387302..397442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L57_RS02030 (P3L57_02030) srfAB 389166..392258 (+) 3093 Protein_356 surfactin non-ribosomal peptide synthetase SrfAB -
  P3L57_RS02035 (P3L57_02035) comS 392302..392442 (+) 141 WP_223203921.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=805894 P3L57_RS02035 WP_223203921.1 392302..392442(+) (comS) [Bacillus sp. B28]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=805894 P3L57_RS02035 WP_223203921.1 392302..392442(+) (comS) [Bacillus sp. B28]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913