Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P3R60_RS08160 Genome accession   NZ_CP120510
Coordinates   1581874..1582593 (+) Length   239 a.a.
NCBI ID   WP_160544568.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1576874..1587593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS08140 trmL 1577817..1578353 (+) 537 WP_316606810.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -
  P3R60_RS08145 - 1578434..1580944 (+) 2511 WP_316606177.1 GBS Bsp-like repeat-containing protein -
  P3R60_RS08150 - 1581085..1581387 (-) 303 WP_115130749.1 hypothetical protein -
  P3R60_RS08155 - 1581387..1581803 (-) 417 WP_316606178.1 HIT family protein -
  P3R60_RS08160 pptA 1581874..1582593 (+) 720 WP_160544568.1 ABC transporter ATP-binding protein Regulator
  P3R60_RS08165 - 1582595..1583629 (+) 1035 WP_316606179.1 ABC transporter permease -
  P3R60_RS08170 ccrZ 1583682..1584470 (+) 789 WP_202394772.1 cell cycle regulator CcrZ -
  P3R60_RS08175 trmB 1584467..1585102 (+) 636 WP_316606180.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  P3R60_RS08185 - 1585382..1585828 (+) 447 WP_104968411.1 pyridoxamine 5'-phosphate oxidase family protein -
  P3R60_RS08190 rimP 1585942..1586430 (+) 489 WP_370627315.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 26692.92 Da        Isoelectric Point: 4.4139

>NTDB_id=805868 P3R60_RS08160 WP_160544568.1 1581874..1582593(+) (pptA) [Streptococcus pluranimalium strain SP21-2]
MLKIDHLVGGYVNIPVLKDISFEVSSGEVVGLIGLNGAGKSTTISEIIGLLQPYQGSVTLDGLQLLENPESYRRKIGYIP
ETPILYEELTLQEHLDTVALAYGLGEQQELRQRLLQLFRLEDKLDWYPINFSKGMKQKVMIIAALMIEPSLLIVDEPFLG
LDPLAIRDLTTIIAEEKAKGTAVLMSTHVLDSAEKMCDRFVILHHGEILANGSLEELRQQFSLPTADLTDIYMQLTQEN

Nucleotide


Download         Length: 720 bp        

>NTDB_id=805868 P3R60_RS08160 WP_160544568.1 1581874..1582593(+) (pptA) [Streptococcus pluranimalium strain SP21-2]
ATGCTAAAAATTGATCATTTAGTTGGTGGCTACGTTAATATACCTGTTTTAAAGGACATTTCTTTTGAGGTTTCCTCAGG
AGAAGTTGTTGGCTTAATTGGGCTTAACGGAGCAGGGAAATCAACGACTATCAGTGAAATCATTGGACTTTTGCAACCTT
ATCAGGGAAGTGTGACTTTGGATGGCTTGCAATTGTTAGAAAATCCAGAAAGTTACCGTCGCAAAATAGGTTATATCCCT
GAGACACCAATCTTGTATGAAGAGTTGACCTTGCAAGAACACTTAGATACAGTTGCCTTAGCTTATGGTTTAGGTGAGCA
ACAGGAATTACGCCAAAGGCTATTACAACTCTTTCGTTTAGAGGATAAATTAGATTGGTACCCCATTAATTTTTCAAAAG
GGATGAAGCAGAAAGTAATGATTATTGCAGCTCTCATGATTGAGCCAAGCTTATTGATTGTGGATGAGCCTTTTTTGGGA
TTAGATCCTTTAGCGATTAGAGATTTGACGACTATTATTGCAGAGGAAAAAGCTAAAGGCACAGCTGTTTTGATGAGTAC
TCATGTTCTGGATTCTGCTGAAAAAATGTGTGACCGTTTTGTCATTCTCCATCATGGTGAGATTCTAGCTAACGGTAGTC
TAGAAGAGTTACGACAACAATTTAGTCTACCGACAGCTGATTTGACTGATATTTATATGCAATTGACGCAGGAGAATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

69.456

100

0.695
  pptA Streptococcus thermophilus LMD-9

68.619

100

0.686