Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   P3R60_RS02030 Genome accession   NZ_CP120510
Coordinates   422308..424056 (-) Length   582 a.a.
NCBI ID   WP_278025186.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 417308..429056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS02005 - 417618..418793 (-) 1176 WP_316606536.1 CapA family protein -
  P3R60_RS02010 rpsU 419016..419192 (-) 177 WP_002884573.1 30S ribosomal protein S21 -
  P3R60_RS02015 - 419291..419866 (-) 576 WP_316606788.1 uracil-DNA glycosylase family protein -
  P3R60_RS02020 - 419853..421235 (-) 1383 WP_316606537.1 metallophosphoesterase -
  P3R60_RS02025 - 421345..422064 (-) 720 WP_316606538.1 GDSL-type esterase/lipase family protein -
  P3R60_RS02030 rcrQ 422308..424056 (-) 1749 WP_278025186.1 ABC transporter ATP-binding protein Regulator
  P3R60_RS02035 rcrP 424046..425848 (-) 1803 WP_278025185.1 ABC transporter ATP-binding protein Regulator
  P3R60_RS02040 - 425841..426290 (-) 450 WP_218654241.1 MarR family winged helix-turn-helix transcriptional regulator -
  P3R60_RS02045 tnpA 426681..427145 (-) 465 Protein_406 IS200/IS605 family transposase -
  P3R60_RS02050 rplL 427364..427732 (-) 369 WP_018379545.1 50S ribosomal protein L7/L12 -
  P3R60_RS02055 rplJ 427807..428310 (-) 504 WP_104968827.1 50S ribosomal protein L10 -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64749.96 Da        Isoelectric Point: 5.6193

>NTDB_id=805837 P3R60_RS02030 WP_278025186.1 422308..424056(-) (rcrQ) [Streptococcus pluranimalium strain SP21-2]
MKTKKKSLLSQSLPFLKGFRFVFVLAIMFTICSSIITVIGPDKLKEITDVITEGIVATVDMAKIKDIGFQLALLYGGGAL
LSYSASFIISTMIQHFSQRMRIAIAEKINRVPLSYFDAHSQGDTLSRVTNDVDNMTQALNQSLTTLVSSSVLLVGSIIMM
FKTNGIMAGTAIGSVLLGFLLSMVIMMKSQPFFKRQQDNLAAINGYVEETYTGHNLVISYNAREQSKTRFEELNQNLYSS
MWQSQFFSGIMMPMMQFIGNFGYVMVCLVGAKLVIDGDITMGTIVAFMTYVRIFSQPLGQMAQGATQMQTVSATMGRIFE
FLDAPEMEDESSKNQQLLDIKGHVDFDHVTFGYTPEKTIIKDFSAQAKPGQKVAIVGPTGAGKTTIVNLLMRFYEINSGS
ISIDQVNVHDMTREEVHNAFSMVLQDTWLFEGTIKENLIYNQTHITDEQVVEAAKAVGIHHFIMTLPKNYDSVLDDTLTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HETLMTENGFYADLYNSQFEVA

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=805837 P3R60_RS02030 WP_278025186.1 422308..424056(-) (rcrQ) [Streptococcus pluranimalium strain SP21-2]
GTGAAAACTAAGAAAAAATCATTACTCAGCCAGTCTCTTCCTTTCTTGAAAGGCTTCCGGTTTGTTTTTGTACTGGCAAT
TATGTTTACCATCTGTTCAAGTATCATTACGGTTATTGGACCGGATAAGCTAAAAGAAATCACCGACGTTATTACAGAAG
GTATTGTTGCCACGGTTGACATGGCTAAAATCAAGGACATTGGTTTCCAATTAGCCCTCCTTTATGGTGGCGGTGCCCTT
TTGTCTTACTCGGCTAGCTTTATCATTTCAACTATGATTCAGCATTTTTCACAACGCATGCGCATAGCCATTGCTGAAAA
AATTAATCGTGTGCCTTTGTCATACTTTGACGCTCATTCACAGGGAGATACCCTATCACGTGTGACCAATGATGTGGATA
ATATGACCCAGGCTTTAAACCAGAGTTTGACTACTCTTGTTTCATCTAGTGTTCTCTTAGTTGGTTCCATTATCATGATG
TTTAAAACTAATGGCATCATGGCTGGGACAGCGATTGGATCAGTTCTCTTAGGTTTCTTGCTAAGTATGGTCATTATGAT
GAAAAGCCAACCATTCTTTAAGCGTCAGCAGGATAATTTAGCGGCGATTAATGGTTACGTTGAGGAAACGTATACAGGGC
ATAATCTGGTTATTTCTTACAATGCGAGAGAACAATCCAAAACAAGATTCGAAGAGCTCAATCAAAATCTTTACAGCAGT
ATGTGGCAGTCCCAATTTTTCTCAGGGATTATGATGCCCATGATGCAGTTTATTGGTAATTTTGGCTATGTTATGGTCTG
CTTGGTTGGAGCTAAACTGGTCATTGATGGTGACATTACGATGGGAACTATTGTCGCTTTTATGACTTATGTTCGTATCT
TCTCTCAACCTCTTGGGCAAATGGCTCAGGGGGCTACACAAATGCAAACTGTTTCTGCAACGATGGGAAGAATTTTTGAA
TTCCTCGATGCGCCTGAAATGGAAGACGAAAGTTCTAAAAATCAGCAATTATTAGACATTAAAGGTCATGTTGATTTTGA
CCATGTGACTTTTGGGTATACACCTGAAAAAACGATTATTAAGGATTTTTCAGCTCAAGCTAAACCTGGTCAAAAAGTGG
CCATTGTTGGTCCGACAGGGGCTGGTAAAACAACCATTGTCAATCTCCTCATGCGTTTTTATGAGATCAACAGTGGTAGC
ATTAGTATCGATCAAGTCAATGTGCACGATATGACGCGAGAAGAAGTCCATAATGCCTTCTCAATGGTCCTACAAGATAC
TTGGCTTTTTGAAGGAACTATCAAAGAAAACTTGATTTATAATCAGACTCATATCACAGATGAGCAAGTAGTTGAAGCGG
CCAAGGCTGTTGGGATCCATCACTTTATCATGACCCTTCCTAAAAATTACGATAGTGTCTTGGATGATACCTTAACCTTA
TCAGTTGGTCAGAAACAGCTCTTGACCATTGCACGTGCTCTTTTGAAAGATGCACCGCTCTTGATTTTGGATGAAGCTAC
CTCATCTGTCGATACACGTACGGAAGAGTTGATTCAAAAAGCCATGGACAAACTTATGGAAGGCAGAACATCCTTTGTCA
TCGCTCACCGTTTGTCAACCATCCGAAACGCTGATTTGATTTTGGTCATGAAAGATGGTAACATCATCGAGCAGGGTAAT
CATGAAACCTTGATGACTGAAAATGGTTTCTATGCGGATCTTTATAATTCGCAATTTGAAGTGGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.973

100

0.742