Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   P3R60_RS02035 Genome accession   NZ_CP120510
Coordinates   424046..425848 (-) Length   600 a.a.
NCBI ID   WP_278025185.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP21-2     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 426709..426972 424046..425848 flank 861


Gene organization within MGE regions


Location: 424046..426972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS02035 rcrP 424046..425848 (-) 1803 WP_278025185.1 ABC transporter ATP-binding protein Regulator
  P3R60_RS02040 - 425841..426290 (-) 450 WP_218654241.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66708.41 Da        Isoelectric Point: 6.0497

>NTDB_id=805838 P3R60_RS02035 WP_278025185.1 424046..425848(-) (rcrP) [Streptococcus pluranimalium strain SP21-2]
MFKLLKYLNGKEWAMIALSTVFICLAVWMDIETPAYMSDITKLLQEKGTTTADIMEPGWKMLGLSLGSFIMAVCVGFLAA
RTAASFTTRLRSEIFNQVMDYSDAEIKQFSVPSLLTRTTNDLTQLQILITMGMQVVTRGPIMAIWALTKIWGKSSEWTWS
VAIAVAVVMLLLATLLIFAFPRLQKVQKYTDGLNATMREILSGIRVVRAYNAEDYQDAKFSEQNLALTRLNLFASRLFAL
MNPVMTVVSSGLTLAIYWIGAQMIDNIAIKMTSRAAAMTSVQDRITVFSDMVVFSSYAMQVVMGFMMMVAIFIILPRALV
SAGRINEVLSLEPSIIFKKTSTEKLAEKGQVEYRNVTFKYAQESEAVVENISFKASAGQTIAFIGSTGSGKTSLAKLLPR
FYDVTSGQILVDGIDIKDYSHEELNNKVGYIPQKAVLFSGTIRSNMTFGESGQKQPDDQAIWDALELAQAKDFVQAKEDG
LETEVAQGGTNFSGGQRQRLAIARALARKPEMLIFDDSFSALDYKTDRILRQTLNEKTGQMTKLIVAQRISTIMDADQIL
VLDQGQVVGQGTHKELLANNSVYQEIAYSQLSKEELEREN

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=805838 P3R60_RS02035 WP_278025185.1 424046..425848(-) (rcrP) [Streptococcus pluranimalium strain SP21-2]
ATGTTTAAATTATTGAAATATTTAAATGGTAAAGAGTGGGCGATGATTGCCCTATCTACCGTTTTTATTTGTTTAGCTGT
CTGGATGGATATTGAAACACCAGCCTACATGTCAGATATTACCAAGTTACTTCAGGAAAAAGGAACAACGACAGCTGATA
TTATGGAACCGGGTTGGAAAATGCTCGGATTATCTTTGGGAAGTTTTATCATGGCAGTTTGTGTCGGTTTTTTAGCAGCT
CGAACAGCAGCTAGTTTTACGACGCGTTTACGTTCCGAAATTTTCAATCAGGTTATGGATTATTCCGATGCTGAGATCAA
ACAATTCTCCGTACCAAGCCTCTTAACCAGAACAACCAATGACCTAACGCAGTTACAAATTTTAATTACCATGGGTATGC
AGGTAGTAACGCGTGGTCCTATTATGGCAATCTGGGCCTTGACCAAGATTTGGGGTAAAAGTAGTGAGTGGACCTGGTCC
GTTGCTATTGCGGTTGCAGTAGTCATGCTCTTGTTAGCAACTCTTTTGATTTTTGCTTTTCCGCGTTTACAAAAGGTCCA
AAAATACACTGATGGTCTTAATGCAACCATGCGTGAAATTTTATCAGGGATTCGCGTTGTTCGAGCCTATAATGCTGAAG
ACTATCAAGATGCAAAATTTTCAGAGCAAAACCTAGCTCTGACTCGTTTGAATCTTTTTGCCAGTCGCCTATTTGCCTTG
ATGAATCCAGTCATGACAGTAGTTTCCAGTGGTTTGACCTTGGCTATTTATTGGATTGGGGCTCAGATGATTGATAATAT
CGCTATCAAGATGACGTCAAGGGCAGCTGCTATGACAAGTGTTCAAGATCGTATTACTGTTTTTAGTGATATGGTTGTTT
TTTCATCCTACGCTATGCAAGTTGTCATGGGCTTTATGATGATGGTCGCTATCTTTATTATCCTACCGCGTGCCTTGGTG
TCAGCAGGGCGGATTAATGAAGTGCTTTCTTTGGAACCAAGCATTATCTTCAAGAAAACATCAACTGAGAAATTAGCTGA
AAAAGGCCAAGTAGAATACCGAAATGTTACCTTCAAATATGCCCAAGAATCAGAAGCAGTTGTCGAAAATATCTCCTTCA
AAGCTAGCGCAGGTCAAACGATAGCCTTTATCGGGTCAACTGGTTCTGGTAAAACAAGTTTGGCTAAACTTTTACCACGT
TTTTATGATGTGACGTCAGGTCAGATTTTAGTTGATGGTATTGATATTAAGGATTACAGTCATGAGGAACTCAATAATAA
AGTTGGTTATATCCCTCAGAAAGCTGTACTCTTTAGTGGAACTATTCGTTCTAACATGACCTTTGGTGAGAGCGGTCAAA
AACAACCAGATGATCAAGCTATTTGGGATGCGCTAGAATTGGCTCAAGCTAAAGACTTTGTCCAAGCTAAAGAAGACGGA
CTTGAAACGGAAGTGGCACAAGGTGGAACAAACTTCTCTGGTGGTCAACGCCAACGATTGGCGATTGCGCGTGCCCTTGC
TCGTAAACCGGAAATGTTGATTTTTGATGATTCTTTCTCAGCCCTTGATTATAAGACGGATCGTATTTTGCGTCAGACCT
TAAATGAAAAAACGGGACAGATGACCAAACTCATTGTTGCTCAAAGGATTTCAACCATTATGGATGCGGACCAAATCTTA
GTATTGGATCAAGGTCAGGTTGTTGGTCAAGGCACTCATAAGGAACTTTTGGCAAACAACAGCGTTTACCAAGAAATTGC
CTATTCACAATTATCTAAGGAGGAATTGGAACGTGAAAACTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

73.367

99.5

0.73