Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   P3T75_RS09110 Genome accession   NZ_CP120467
Coordinates   1892107..1893783 (-) Length   558 a.a.
NCBI ID   WP_206903874.1    Uniprot ID   -
Organism   Enterococcus montenegrensis strain CoE-012-22     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1887107..1898783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3T75_RS09080 (P3T75_09075) ftsL 1888239..1888649 (-) 411 WP_206903880.1 cell division protein FtsL -
  P3T75_RS09085 (P3T75_09080) rsmH 1888664..1889617 (-) 954 WP_282461390.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  P3T75_RS09090 (P3T75_09085) mraZ 1889632..1890063 (-) 432 WP_206903878.1 division/cell wall cluster transcriptional repressor MraZ -
  P3T75_RS09095 (P3T75_09090) - 1890226..1890594 (-) 369 WP_282461391.1 DUF3397 domain-containing protein -
  P3T75_RS09100 (P3T75_09095) - 1890768..1891721 (+) 954 WP_206903876.1 magnesium transporter CorA family protein -
  P3T75_RS09105 (P3T75_09100) - 1891800..1891916 (+) 117 WP_016172522.1 DUF4044 domain-containing protein -
  P3T75_RS09110 (P3T75_09105) recN 1892107..1893783 (-) 1677 WP_206903874.1 DNA repair protein RecN Machinery gene
  P3T75_RS09115 (P3T75_09110) argR 1893802..1894251 (-) 450 WP_206903873.1 arginine repressor -
  P3T75_RS09120 (P3T75_09115) - 1894533..1895348 (-) 816 WP_282461392.1 TlyA family RNA methyltransferase -
  P3T75_RS09125 (P3T75_09120) - 1895350..1896246 (-) 897 WP_282461393.1 polyprenyl synthetase family protein -
  P3T75_RS09130 (P3T75_09125) - 1896243..1896464 (-) 222 WP_206903870.1 exodeoxyribonuclease VII small subunit -
  P3T75_RS09135 (P3T75_09130) xseA 1896517..1897869 (-) 1353 WP_282461394.1 exodeoxyribonuclease VII large subunit -
  P3T75_RS09140 (P3T75_09135) - 1897870..1898727 (-) 858 WP_282461395.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 558 a.a.        Molecular weight: 62727.05 Da        Isoelectric Point: 4.8047

>NTDB_id=805749 P3T75_RS09110 WP_206903874.1 1892107..1893783(-) (recN) [Enterococcus montenegrensis strain CoE-012-22]
MLVELAIKNFAIISSLRLQFHEGMTALTGETGAGKSIIIDAMGLLCGSRGSSDYIREGSSKCSLEGLFELPKDSQFSELL
QELGIETEEELLIVQRDISQSGKNICRVNGRTLTLANLRRIGAFLVDIQGQNEHQELLQPERHLHLLDQFGGKKFHGLLE
KYQRAYEKFTHLNQQMRKIQANEQSYVQRVDMLHFQQDEIASANLVPNEEEELAEERAKLGNYQKIVDSLAQSYALLTND
EANSLDGIGAALTSMQDIAHLDSEYETVSENLQSAFYLLQDAAGDISRQLDSLSFDEGRLEEVNQRLELIRQLKRKYGET
ISEILVYYDEIKKELAESAFSEGQLEQLAKEVSAQEEITWHLAEELHQERKEIARKLAKAIVTELKELYMEHSQFEVRFK
NGKKVLHENGFDEVEFYLTTNPGEPLKPLVKVASGGELSRMLLALKTIFSQSQGITSIVFDEVDTGVSGRVAQAIAEKIA
KIAENSQVLCITHLPQVAAIADYQYYIKKEISHGRTQTIVSELAPNKRVNEIARMLAGSEVTDLTLEHAKELLAMAGH

Nucleotide


Download         Length: 1677 bp        

>NTDB_id=805749 P3T75_RS09110 WP_206903874.1 1892107..1893783(-) (recN) [Enterococcus montenegrensis strain CoE-012-22]
ATGTTAGTAGAATTAGCGATTAAAAATTTTGCCATTATTTCCAGCCTGCGACTGCAGTTTCATGAAGGAATGACTGCCTT
AACCGGGGAAACAGGAGCAGGTAAGTCGATTATTATTGATGCGATGGGCCTTTTGTGTGGTAGTCGTGGATCGAGTGATT
ATATTCGTGAAGGCAGCAGTAAATGTAGTCTAGAAGGCTTATTTGAATTGCCTAAAGATAGTCAATTTAGTGAACTATTA
CAAGAATTAGGCATTGAAACAGAAGAGGAATTATTAATAGTGCAGCGAGATATTAGCCAAAGTGGTAAAAATATTTGTCG
CGTGAACGGGCGCACATTGACGTTAGCTAATTTGCGCCGGATTGGGGCTTTTTTAGTTGATATTCAAGGGCAAAATGAAC
ATCAAGAACTTTTGCAGCCGGAACGTCATTTGCATTTATTGGATCAATTCGGTGGTAAAAAATTTCATGGGTTATTGGAA
AAGTATCAACGAGCCTATGAAAAATTTACCCATTTGAACCAGCAGATGCGTAAAATTCAAGCCAATGAACAGTCCTATGT
ACAAAGAGTGGATATGCTGCATTTTCAGCAAGATGAAATTGCCAGCGCAAATTTAGTACCAAACGAAGAAGAAGAATTAG
CAGAAGAACGAGCAAAATTGGGTAACTATCAAAAAATTGTCGATAGTTTGGCCCAAAGTTATGCGCTTTTAACCAATGAT
GAAGCAAATAGTTTAGATGGAATCGGTGCAGCTTTAACGAGTATGCAAGATATTGCGCATTTGGATAGTGAATACGAAAC
AGTCAGTGAAAATTTACAATCTGCTTTTTATCTGTTACAAGATGCTGCTGGGGATATTTCCCGGCAATTAGATAGTTTAT
CCTTTGATGAAGGTCGCCTAGAAGAGGTTAACCAACGTTTGGAATTAATTCGCCAATTAAAACGTAAATATGGTGAAACT
ATTTCAGAAATTTTAGTTTACTATGATGAAATAAAAAAAGAATTGGCAGAATCGGCTTTTTCTGAAGGACAGTTGGAACA
ATTAGCAAAAGAGGTCAGTGCCCAAGAAGAAATTACTTGGCACTTAGCTGAAGAATTACACCAAGAGCGCAAAGAAATTG
CTAGAAAACTTGCCAAAGCAATTGTAACCGAGTTAAAAGAACTCTATATGGAACACAGTCAATTTGAAGTACGGTTTAAA
AATGGTAAAAAAGTACTCCATGAAAATGGGTTTGATGAAGTTGAATTCTATTTGACTACAAATCCGGGAGAACCGTTAAA
ACCATTAGTCAAAGTCGCGTCTGGTGGGGAATTATCGCGGATGTTGTTAGCATTAAAAACCATTTTTTCTCAAAGTCAGG
GCATTACAAGTATTGTTTTTGATGAAGTTGATACTGGCGTGAGTGGCAGGGTCGCACAAGCTATTGCCGAGAAAATCGCT
AAAATTGCTGAAAACTCACAAGTTCTATGTATTACCCACTTGCCACAAGTGGCCGCCATTGCCGATTATCAATATTACAT
TAAAAAAGAAATTAGCCATGGACGGACCCAAACGATCGTCTCTGAATTAGCCCCGAATAAACGAGTGAATGAAATCGCCC
GTATGTTAGCGGGTTCAGAAGTGACAGATTTAACGCTGGAACACGCCAAAGAACTTTTAGCTATGGCAGGTCATTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-509)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.772

100

0.498