Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   P3T75_RS02980 Genome accession   NZ_CP120467
Coordinates   630345..632156 (+) Length   603 a.a.
NCBI ID   WP_282462556.1    Uniprot ID   -
Organism   Enterococcus montenegrensis strain CoE-012-22     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 625345..637156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3T75_RS02960 (P3T75_02960) - 626364..627080 (-) 717 WP_282462176.1 HAD family hydrolase -
  P3T75_RS02965 (P3T75_02965) spxA 627962..628360 (+) 399 WP_173103569.1 transcriptional regulator SpxA -
  P3T75_RS02970 (P3T75_02970) - 628566..629219 (+) 654 WP_206904572.1 adaptor protein MecA -
  P3T75_RS02975 (P3T75_02975) - 629299..630312 (+) 1014 WP_282462177.1 competence protein CoiA -
  P3T75_RS02980 (P3T75_02980) pepF 630345..632156 (+) 1812 WP_282462556.1 oligoendopeptidase F Regulator
  P3T75_RS02985 (P3T75_02985) - 632262..632918 (-) 657 WP_282462178.1 DsbA family protein -
  P3T75_RS02990 (P3T75_02990) - 633000..633581 (-) 582 WP_206904532.1 CYTH domain-containing protein -
  P3T75_RS02995 (P3T75_02995) - 633947..634615 (+) 669 WP_071864506.1 GTP pyrophosphokinase family protein -
  P3T75_RS03000 (P3T75_03000) - 634615..635418 (+) 804 WP_206904541.1 NAD kinase -
  P3T75_RS03005 (P3T75_03005) - 635425..636318 (+) 894 WP_206904542.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 68841.35 Da        Isoelectric Point: 4.8593

>NTDB_id=805735 P3T75_RS02980 WP_282462556.1 630345..632156(+) (pepF) [Enterococcus montenegrensis strain CoE-012-22]
MMATKQLPTRESLPTELTWDLTPIFADDQAFDTAFADLKEELKQADKYKGTLATNATAFLAALEFCLAIYRKLETLYVYS
HLKNDQDTANTTYQGLYARASSLLAEASAAISWFEPEVLTLSDDQIWSYFEEEPKLAVYRHYVAQMVDNRAHVLPADQEE
LLAGASEIFNAADDIFSVLNNADLVFPTIEGSDGEKIQLSHGVYGQLMEATDRSVREAAFKGLYSVYGQFRNTFAQTLSS
HVKGHNFKAKARKYTSAREASLSNNHIPESVYDTLVEVVNKHLPLLHRYVALRKKLLATDELHMYDMYTPVLGEAPIRYT
YEEAVEKAKEALHVMGPEYNKIVEQAFSSRWIDVVENKGKRSGAYSSGAYDTAPYILMNWHDTLDQLFTLVHEMGHSVHS
YFTRNNQPFVYGDYSIFLAEIASTTNENILTEHLLETEKDPKVRAYILNHYLDGFKGTIFRQTQFAEFEHFIHTEDAKGT
PLTSEYLNDYYGDLNAKYYGPDVTKDEEIKLEWARIPHFYYNYYVYQYATGFSAASALAKKILTKEEGALEHYLNYLKAG
NSDYPIEVMKKAGVDMTKADYIEDAMKMFEERLSELETLVAQL

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=805735 P3T75_RS02980 WP_282462556.1 630345..632156(+) (pepF) [Enterococcus montenegrensis strain CoE-012-22]
ATTATGGCGACAAAACAATTACCAACAAGAGAAAGCTTACCGACAGAACTGACCTGGGATTTAACTCCAATTTTTGCTGA
CGACCAAGCTTTTGACACAGCCTTTGCTGATTTGAAAGAAGAATTAAAACAAGCGGATAAATACAAAGGAACACTAGCAA
CGAATGCTACGGCTTTCTTAGCGGCTTTGGAGTTTTGCTTGGCTATTTATCGCAAATTAGAAACGTTATATGTGTACAGT
CACTTAAAAAATGATCAAGATACCGCAAATACCACTTATCAAGGATTATATGCGCGGGCTAGCAGTTTATTAGCAGAAGC
AAGTGCGGCTATTTCTTGGTTTGAGCCAGAAGTTTTGACACTGTCAGATGATCAGATTTGGTCTTATTTTGAAGAAGAAC
CAAAATTGGCAGTTTATCGCCATTATGTAGCGCAAATGGTCGACAATCGTGCCCATGTTTTGCCGGCGGACCAAGAAGAA
TTATTGGCTGGGGCAAGTGAAATTTTTAATGCAGCAGATGATATTTTCTCTGTGTTAAATAATGCAGATCTCGTGTTTCC
TACGATTGAAGGCAGTGATGGAGAAAAAATTCAATTGTCCCACGGTGTGTACGGCCAATTAATGGAAGCAACGGATCGCA
GCGTGCGAGAAGCTGCTTTTAAAGGATTGTACAGTGTGTATGGCCAATTTCGTAATACGTTTGCCCAAACGTTAAGCTCT
CATGTCAAAGGACATAATTTTAAAGCAAAAGCACGAAAATACACGTCAGCTAGAGAAGCTTCTTTAAGTAATAATCATAT
TCCAGAAAGTGTTTATGATACCTTAGTTGAAGTTGTGAATAAACATTTACCACTACTACATCGTTATGTAGCATTGCGAA
AAAAATTACTCGCAACTGATGAATTGCACATGTATGATATGTACACACCTGTTTTAGGAGAAGCGCCAATTCGCTATACT
TATGAAGAAGCGGTTGAAAAGGCTAAAGAAGCTTTACATGTGATGGGACCAGAATACAATAAAATCGTAGAACAAGCTTT
TTCAAGTCGTTGGATTGACGTGGTTGAAAATAAAGGCAAACGTAGTGGTGCTTATTCTTCCGGTGCTTATGATACAGCTC
CTTATATTTTAATGAATTGGCATGATACCTTAGACCAACTATTTACTTTAGTGCACGAAATGGGTCATAGTGTCCACAGC
TATTTTACTCGTAATAATCAACCTTTTGTTTACGGGGATTACTCTATTTTCTTAGCAGAAATCGCCTCTACAACCAATGA
AAATATTTTGACAGAACATTTGTTAGAGACTGAAAAAGACCCGAAAGTACGGGCATATATCTTAAATCACTATTTAGATG
GCTTTAAGGGAACTATTTTCCGCCAAACGCAATTTGCTGAATTTGAGCACTTTATCCATACTGAGGATGCAAAAGGTACG
CCTTTAACAAGTGAGTATTTAAATGACTATTACGGGGATTTAAATGCGAAATATTATGGACCTGATGTAACAAAAGATGA
AGAGATTAAATTGGAATGGGCGCGAATTCCACATTTTTACTACAACTATTACGTTTATCAATATGCGACGGGCTTTTCTG
CCGCTTCTGCCTTGGCGAAGAAAATTTTAACCAAAGAAGAGGGCGCGTTGGAACATTATTTGAATTATTTGAAGGCTGGT
AATAGTGATTATCCAATTGAAGTAATGAAAAAAGCCGGTGTGGATATGACAAAAGCTGATTATATTGAAGATGCCATGAA
GATGTTTGAAGAACGTTTGAGTGAATTGGAAACATTAGTAGCTCAATTATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(117-186)

Peptidase family M3 (Peptidase_M3)

(207-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.853

98.01

0.557