Detailed information NTG0805717

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: P5W78_RS09890
• Genome accession: NZ_CP120426
• Coordinates: 2110772..2111746 (-)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 25FSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2105772..2116746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5W78_RS09855	gcvT	2106290..2107381 (-)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-
P5W78_RS09860	-	2107599..2108111 (-)	513	WP_002440040.1	shikimate kinase	-
P5W78_RS09865	-	2108276..2108767 (-)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
P5W78_RS09870	-	2108691..2108984 (-)	294	WP_001831116.1	hypothetical protein	-
P5W78_RS09875	comGD	2108971..2109408 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
P5W78_RS09880	comGC	2109398..2109715 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
P5W78_RS09885	comGB	2109733..2110800 (-)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
P5W78_RS09890	comGA	2110772..2111746 (-)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
P5W78_RS09895	-	2111803..2112426 (-)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
P5W78_RS09900	-	2112426..2112752 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
P5W78_RS09905	-	2112752..2113738 (-)	987	WP_001831113.1	ROK family glucokinase	-
P5W78_RS09910	-	2113738..2113938 (-)	201	WP_001831138.1	YqgQ family protein	-
P5W78_RS09915	-	2113922..2115382 (-)	1461	WP_002484879.1	rhomboid family intramembrane serine protease	-
P5W78_RS09920	-	2115383..2115934 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
P5W78_RS09925	rpmG	2116117..2116266 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=805717 P5W78_RS09890 WP_001831109.1 2110772..2111746(-) (comGA) [Staphylococcus epidermidis strain 25FSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=805717 P5W78_RS09890 WP_001831109.1 2110772..2111746(-) (comGA) [Staphylococcus epidermidis strain 25FSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701