Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5W78_RS02620 Genome accession   NZ_CP120426
Coordinates   533517..534182 (-) Length   221 a.a.
NCBI ID   WP_001830679.1    Uniprot ID   A0A2G7HYS8
Organism   Staphylococcus epidermidis strain 25FSE01     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 528517..539182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5W78_RS02600 - 529047..529637 (-) 591 WP_001830621.1 DUF4064 domain-containing protein -
  P5W78_RS02605 - 529741..531753 (-) 2013 WP_002456335.1 ABC transporter permease -
  P5W78_RS02610 - 531755..532504 (-) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  P5W78_RS02615 braS 532615..533511 (-) 897 WP_002437988.1 sensor histidine kinase Regulator
  P5W78_RS02620 braR 533517..534182 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  P5W78_RS02625 - 534213..534392 (-) 180 WP_001830653.1 hypothetical protein -
  P5W78_RS02630 - 534690..536159 (+) 1470 WP_218085189.1 alkaline phosphatase -
  P5W78_RS02635 - 536282..537826 (-) 1545 WP_001830616.1 NAD(P)H-binding protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.71 Da        Isoelectric Point: 5.0250

>NTDB_id=805697 P5W78_RS02620 WP_001830679.1 533517..534182(-) (braR) [Staphylococcus epidermidis strain 25FSE01]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=805697 P5W78_RS02620 WP_001830679.1 533517..534182(-) (braR) [Staphylococcus epidermidis strain 25FSE01]
ATGAAAATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATATAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G7HYS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792