Detailed information NTG0805657

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: P5W76_RS00440
• Genome accession: NZ_CP120425
• Coordinates: 86874..87848 (+)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 25DSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 81874..92848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5W76_RS00405	rpmG	82354..82503 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
P5W76_RS00410	-	82686..83237 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
P5W76_RS00415	-	83238..84698 (+)	1461	WP_277369499.1	rhomboid family intramembrane serine protease	-
P5W76_RS00420	-	84682..84882 (+)	201	WP_001831138.1	YqgQ family protein	-
P5W76_RS00425	-	84882..85868 (+)	987	WP_001831113.1	ROK family glucokinase	-
P5W76_RS00430	-	85868..86194 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
P5W76_RS00435	-	86194..86817 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
P5W76_RS00440	comGA	86874..87848 (+)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
P5W76_RS00445	comGB	87820..88887 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
P5W76_RS00450	comGC	88905..89222 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
P5W76_RS00455	comGD	89212..89649 (+)	438	WP_203352106.1	competence type IV pilus minor pilin ComGD	-
P5W76_RS00460	-	89636..89929 (+)	294	WP_001831116.1	hypothetical protein	-
P5W76_RS00465	-	89853..90344 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
P5W76_RS00470	-	90509..91021 (+)	513	WP_002440040.1	shikimate kinase	-
P5W76_RS00475	gcvT	91239..92330 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=805657 P5W76_RS00440 WP_001831109.1 86874..87848(+) (comGA) [Staphylococcus epidermidis strain 25DSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=805657 P5W76_RS00440 WP_001831109.1 86874..87848(+) (comGA) [Staphylococcus epidermidis strain 25DSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701