Detailed information NTG0805611

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: P5W75_RS09995
• Genome accession: NZ_CP120423
• Coordinates: 2128883..2129857 (-)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain 41DSE01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2123883..2134857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5W75_RS09960	gcvT	2124401..2125492 (-)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-
P5W75_RS09965	-	2125710..2126222 (-)	513	WP_002440040.1	shikimate kinase	-
P5W75_RS09970	-	2126387..2126878 (-)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
P5W75_RS09975	-	2126802..2127095 (-)	294	WP_001831116.1	hypothetical protein	-
P5W75_RS09980	comGD	2127082..2127519 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
P5W75_RS09985	comGC	2127509..2127826 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
P5W75_RS09990	comGB	2127844..2128911 (-)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
P5W75_RS09995	comGA	2128883..2129857 (-)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
P5W75_RS10000	-	2129914..2130537 (-)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
P5W75_RS10005	-	2130537..2130863 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
P5W75_RS10010	-	2130863..2131849 (-)	987	WP_001831113.1	ROK family glucokinase	-
P5W75_RS10015	-	2131849..2132049 (-)	201	WP_001831138.1	YqgQ family protein	-
P5W75_RS10020	-	2132033..2133493 (-)	1461	WP_277374968.1	rhomboid family intramembrane serine protease	-
P5W75_RS10025	-	2133494..2134045 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
P5W75_RS10030	rpmG	2134228..2134377 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=805611 P5W75_RS09995 WP_001831109.1 2128883..2129857(-) (comGA) [Staphylococcus epidermidis strain 41DSE01]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=805611 P5W75_RS09995 WP_001831109.1 2128883..2129857(-) (comGA) [Staphylococcus epidermidis strain 41DSE01]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701