Detailed information NTG0080538

Bioinformatically predicted

Overview

• Name: sinR
• Type: Regulator
• Locus tag: L6490_RS06630
• Genome accession: NZ_AP022994
• Coordinates: 1282756..1283079 (-)
• Length: 107 a.a.
• NCBI ID: WP_236787872.1
• Uniprot ID: -
• Organism: Bacillus cereus strain 30075
• Function: repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation

Genomic Context

Location: 1277756..1288079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6490_RS06605 (BC30075_1221)	-	1278088..1279374 (+)	1287	WP_236787853.1	D-alanyl-D-alanine carboxypeptidase family protein	-
L6490_RS06610 (BC30075_1222)	-	1279567..1280136 (+)	570	WP_000767813.1	signal peptidase I	-
L6490_RS06615 (BC30075_1223)	-	1280199..1280786 (+)	588	WP_062921647.1	CalY family protein	-
L6490_RS06620 (BC30075_1224)	-	1280950..1281813 (+)	864	WP_236787861.1	DUF4047 domain-containing protein	-
L6490_RS06625 (BC30075_1225)	calY	1282087..1282680 (+)	594	WP_236787870.1	biofilm matrix protein CalY	-
L6490_RS06630 (BC30075_1226)	sinR	1282756..1283079 (-)	324	WP_236787872.1	helix-turn-helix domain-containing protein	Regulator
L6490_RS06635 (BC30075_1227)	-	1283159..1283293 (-)	135	WP_000276217.1	anti-repressor SinI family protein	-
L6490_RS06640 (BC30075_1228)	inhA1	1283636..1286023 (+)	2388	WP_236787874.1	immune inhibitor A domain-containing protein	-
L6490_RS06645 (BC30075_1229)	-	1286194..1287561 (+)	1368	WP_062921650.1	aldehyde dehydrogenase	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12368.20 Da
• Isoelectric Point: 8.5404

>NTDB_id=80538 L6490_RS06630 WP_236787872.1 1282756..1283079(-) (sinR) [Bacillus cereus strain 30075]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLF
KDAMNSGVSKEQFREFLEFTKWKQDQK

Nucleotide

• Length: 324 bp

>NTDB_id=80538 L6490_RS06630 WP_236787872.1 1282756..1283079(-) (sinR) [Bacillus cereus strain 30075]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCTTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAGATCAAAA
ATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (6-60)

• Anti-repressor SinI (SinI) (72-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sinR	Bacillus subtilis subsp. subtilis str. 168	66.972	100	0.682