Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RKQ65_RS14865 Genome accession   NZ_CP134562
Coordinates   2979863..2980804 (-) Length   313 a.a.
NCBI ID   WP_020753360.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain XH1041     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2974863..2985804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKQ65_RS14850 (RKQ65_14855) bauB 2977174..2978142 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  RKQ65_RS14855 (RKQ65_14860) bauE 2978149..2978919 (-) 771 WP_000582116.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  RKQ65_RS14860 (RKQ65_14865) bauC 2978916..2979863 (-) 948 WP_001223271.1 ferric acinetobactin ABC transporter permease subunit BauC -
  RKQ65_RS14865 (RKQ65_14870) ceuB 2979863..2980804 (-) 942 WP_020753360.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  RKQ65_RS14870 (RKQ65_14875) - 2980804..2980935 (-) 132 WP_002036877.1 hypothetical protein -
  RKQ65_RS14875 (RKQ65_14880) basB 2981436..2983466 (+) 2031 WP_139161446.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  RKQ65_RS14880 (RKQ65_14885) basA 2983537..2985384 (-) 1848 WP_000910243.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34004.12 Da        Isoelectric Point: 8.6941

>NTDB_id=805364 RKQ65_RS14865 WP_020753360.1 2979863..2980804(-) (ceuB) [Acinetobacter baumannii strain XH1041]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTILVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=805364 RKQ65_RS14865 WP_020753360.1 2979863..2980804(-) (ceuB) [Acinetobacter baumannii strain XH1041]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGATTTTAG
TACCAGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422