Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   L6490_RS06220 Genome accession   NZ_AP022994
Coordinates   1207790..1208473 (+) Length   227 a.a.
NCBI ID   WP_000350720.1    Uniprot ID   A0A0J1I2I3
Organism   Bacillus cereus strain 30075     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1202790..1213473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6490_RS06200 (BC30075_1139) - 1203855..1205501 (+) 1647 WP_000728620.1 peptide ABC transporter substrate-binding protein -
  L6490_RS06205 (BC30075_1140) - 1205530..1205733 (-) 204 WP_000559980.1 hypothetical protein -
  L6490_RS06210 (BC30075_1142) spx 1206344..1206739 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  L6490_RS06215 (BC30075_1143) - 1206789..1207463 (-) 675 WP_000362617.1 TerC family protein -
  L6490_RS06220 (BC30075_1144) mecA 1207790..1208473 (+) 684 WP_000350720.1 adaptor protein MecA Regulator
  L6490_RS06225 (BC30075_1145) - 1208546..1210090 (+) 1545 WP_062922372.1 cardiolipin synthase -
  L6490_RS06230 (BC30075_1146) - 1210172..1211416 (+) 1245 WP_236787817.1 competence protein CoiA family protein -
  L6490_RS06235 (BC30075_1147) pepF 1211467..1213293 (+) 1827 WP_062922370.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26994.06 Da        Isoelectric Point: 3.9822

>NTDB_id=80536 L6490_RS06220 WP_000350720.1 1207790..1208473(+) (mecA) [Bacillus cereus strain 30075]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=80536 L6490_RS06220 WP_000350720.1 1207790..1208473(+) (mecA) [Bacillus cereus strain 30075]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACAAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1I2I3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment