Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L6499_RS06295 Genome accession   NZ_AP022986
Coordinates   1231695..1231871 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus cereus strain 30052     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1226695..1236871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6499_RS06275 (BC30052_1161) clpB 1227032..1229632 (+) 2601 WP_000365382.1 ATP-dependent chaperone ClpB -
  L6499_RS06280 (BC30052_1162) - 1229666..1229848 (-) 183 WP_001211116.1 YjzD family protein -
  L6499_RS06285 (BC30052_1163) - 1230005..1230739 (+) 735 WP_000028701.1 hydrolase -
  L6499_RS06290 (BC30052_1164) - 1230769..1231641 (+) 873 WP_033680842.1 NAD(P)-dependent oxidoreductase -
  L6499_RS06295 (BC30052_1165) comZ 1231695..1231871 (+) 177 WP_009879752.1 ComZ family protein Regulator
  L6499_RS06300 (BC30052_1166) fabH 1232261..1233193 (+) 933 WP_001100538.1 beta-ketoacyl-ACP synthase III -
  L6499_RS06305 (BC30052_1167) fabF 1233225..1234463 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  L6499_RS06310 (BC30052_1168) - 1234570..1235358 (+) 789 WP_000513292.1 DUF2268 domain-containing putative Zn-dependent protease -
  L6499_RS06315 (BC30052_1169) - 1235499..1236245 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=80486 L6499_RS06295 WP_009879752.1 1231695..1231871(+) (comZ) [Bacillus cereus strain 30052]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=80486 L6499_RS06295 WP_009879752.1 1231695..1231871(+) (comZ) [Bacillus cereus strain 30052]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment