Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RKQ73_RS13735 Genome accession   NZ_CP134548
Coordinates   2812348..2813289 (-) Length   313 a.a.
NCBI ID   WP_031958028.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain XH1051     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2807348..2818289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKQ73_RS13720 (RKQ73_13725) bauB 2809659..2810627 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  RKQ73_RS13725 (RKQ73_13730) bauE 2810634..2811404 (-) 771 WP_000582116.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  RKQ73_RS13730 (RKQ73_13735) bauC 2811401..2812348 (-) 948 WP_001223271.1 ferric acinetobactin ABC transporter permease subunit BauC -
  RKQ73_RS13735 (RKQ73_13740) ceuB 2812348..2813289 (-) 942 WP_031958028.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  RKQ73_RS13740 (RKQ73_13745) basB 2813921..2815951 (+) 2031 WP_000939841.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  RKQ73_RS13745 (RKQ73_13750) basA 2816022..2817869 (-) 1848 WP_000910243.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34024.11 Da        Isoelectric Point: 8.6941

>NTDB_id=804766 RKQ73_RS13735 WP_031958028.1 2812348..2813289(-) (ceuB) [Acinetobacter baumannii strain XH1051]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWFLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=804766 RKQ73_RS13735 WP_031958028.1 2812348..2813289(-) (ceuB) [Acinetobacter baumannii strain XH1051]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCAGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGTTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

43.919

94.569

0.415