Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   RKQ73_RS11050 Genome accession   NZ_CP134548
Coordinates   2287938..2289431 (+) Length   497 a.a.
NCBI ID   WP_031980686.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain XH1051     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2282938..2294431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKQ73_RS11025 (RKQ73_11030) uppS 2282979..2283731 (-) 753 WP_000132219.1 polyprenyl diphosphate synthase -
  RKQ73_RS11030 (RKQ73_11035) frr 2283737..2284291 (-) 555 WP_000606428.1 ribosome recycling factor -
  RKQ73_RS11035 (RKQ73_11040) pyrH 2284377..2285105 (-) 729 WP_000852257.1 UMP kinase -
  RKQ73_RS11040 (RKQ73_11045) rimO 2285157..2286500 (-) 1344 WP_000856678.1 30S ribosomal protein S12 methylthiotransferase RimO -
  RKQ73_RS11045 (RKQ73_11055) glnL 2286842..2287951 (+) 1110 WP_000371970.1 nitrogen regulation protein NR(II) -
  RKQ73_RS11050 (RKQ73_11060) luxO 2287938..2289431 (+) 1494 WP_031980686.1 nitrogen regulation protein NR(I) Regulator
  RKQ73_RS11055 (RKQ73_11065) adeN 2289707..2290359 (+) 653 Protein_2164 multidrug efflux transcriptional repressor AdeN -
  RKQ73_RS11060 (RKQ73_11070) argF 2290472..2291392 (+) 921 WP_001207983.1 ornithine carbamoyltransferase -
  RKQ73_RS11065 (RKQ73_11075) - 2291587..2292111 (+) 525 WP_000209131.1 protein tyrosine phosphatase family protein -
  RKQ73_RS11070 (RKQ73_11080) ispF 2292108..2292590 (-) 483 WP_000226512.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  RKQ73_RS11075 (RKQ73_11085) - 2292694..2293338 (+) 645 WP_001139836.1 hypothetical protein -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56241.07 Da        Isoelectric Point: 6.3154

>NTDB_id=804762 RKQ73_RS11050 WP_031980686.1 2287938..2289431(+) (luxO) [Acinetobacter baumannii strain XH1051]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKLFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKSSETSQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKATLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=804762 RKQ73_RS11050 WP_031980686.1 2287938..2289431(+) (luxO) [Acinetobacter baumannii strain XH1051]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTTGAACGTTTACATCATGATGCGCCCGATGTCATCTTAACTG
ACATTCGTATGCCAGGTATTGATGGGTTAACTTTCTTATCTAAAGTGAAAAACTCTCACCCCGACTTGCCTGTTATCATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCAAGCTATCAGACTGGTGCATTTGAGTATTTACCAAAACCATTCGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTGCATATCAATAAGTTGCAGCAGCAAGAAGCGACAAAAACAG
CTTCACCACTACAATCAACAGAAATTATTGGCGAGTCTCCTGCTATGCAAGAGGTTTTCCGAGCGATTGGTCGTTTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAATCAGGCACAGGTAAAGAACTGGTTGCGCATGCTTTACATAAACATTC
TCCACGACGCGCTAAGCTTTTTATTGCTTTAAACATGGCAGCAATTCCTAAAGATTTAATCGAAACGGAATTATTTGGTC
ATGAAAAAGGTGCTTTCACGGGTGCAAACACCCAACATCAAGGCCGCTTTGAACAAGCAAATGGCGGAACACTATTTCTT
GATGAAATTGGTGACATGCCCTTTGAAACACAAACTCGATTGTTACGTGTGCTCGCAGATGGTGAGTTTTACCGGGTTGG
TGGTCATATACCGGTTAAAGTAGATGTCAGAATTGTCGCGGCAACCCATCAAGACTTAGAAAAACTGGTGAATGAAGGTC
GTTTTCGTGAAGACTTATACCATCGTCTAAATGTTATTCGAATTCATATTCCTAAGCTTGCACATCGCAGTGAAGACATC
CCGATGCTGGCTCAACATTTCTTGGCTCGCGCGGGTAAAGAGCTAGGCGTAAGTCCAAAAATTTTGCGCACTGAAACAAC
GGACTATATGCAACAATTACCATGGCCTGGTAATGTTCGTCAGCTTGAAAATACCTGCCGTTGGTTAACCGTCATGATTA
CTGGTCGTGAGGTTTATCCAGAAGATTTACCTTCTGAGCTTAAACAGGTTCCACTCCAAAAAAGTAGTGAGACTAGTCAA
CCAGCACCATCTTTTGAACGTATTTCTTTGCACCATTGGGATGAGCTACTAAGCCAATGGGCAATTCAAAAACTTAAAAA
TGGTGAAATGAAGATTTTAGACATTGCTACTCCAATGTTTGAGCGCACCTTAATTAATGCAGCACTACAGCAAACTCGTG
GGCGCAAACGTCATGCAGCCGAGCTGTTAGGTTGGGGTCGTAACACCCTAACCAGAAAGTTAAAAGAGCTAGGCATGGAT
TCTGCTGATGACGATGATGAGGACGAACATAAAGCAACATTGTCAGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)

Response regulator receiver domain (Response_reg)

(6-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40

90.543

0.362