Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   L6480_RS19615 Genome accession   NZ_AP022981
Coordinates   3876474..3876932 (+) Length   152 a.a.
NCBI ID   WP_016098928.1    Uniprot ID   A0A9W5VK46
Organism   Bacillus cereus strain 30048     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3871474..3881932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6480_RS19600 (BC30048_3877) - 3872144..3872380 (+) 237 WP_000283738.1 hypothetical protein -
  L6480_RS19605 (BC30048_3878) - 3872542..3874650 (-) 2109 WP_000421678.1 polyphosphate kinase -
  L6480_RS19610 (BC30048_3879) - 3874759..3876333 (-) 1575 WP_002198132.1 Ppx/GppA family phosphatase -
  L6480_RS19615 (BC30048_3881) kre 3876474..3876932 (+) 459 WP_016098928.1 YkyB family protein Regulator
  L6480_RS19620 (BC30048_3882) - 3876885..3877625 (-) 741 WP_061457671.1 YkyA family protein -
  L6480_RS19625 (BC30048_3883) - 3878240..3878893 (-) 654 WP_000680820.1 diguanylate cyclase -
  L6480_RS19630 (BC30048_3884) - 3879057..3879290 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  L6480_RS19635 (BC30048_3885) - 3879322..3879822 (-) 501 WP_000708120.1 hypothetical protein -
  L6480_RS19640 (BC30048_3886) - 3880234..3881775 (+) 1542 WP_000449911.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17747.45 Da        Isoelectric Point: 10.6793

>NTDB_id=80454 L6480_RS19615 WP_016098928.1 3876474..3876932(+) (kre) [Bacillus cereus strain 30048]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSESVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=80454 L6480_RS19615 WP_016098928.1 3876474..3876932(+) (kre) [Bacillus cereus strain 30048]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGTCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment